Qingshengfaniella alkalisoli: FPZ52_15675
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Entry
FPZ52_15675 CDS
T06129
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ52_15675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lit03019
]
FPZ52_15675
03009 Ribosome biogenesis [BR:
lit03009
]
FPZ52_15675
Enzymes [BR:
lit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPZ52_15675
Messenger RNA biogenesis [BR:
lit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPZ52_15675
Ribosome biogenesis [BR:
lit03009
]
Prokaryotic type
rRNA helicases
FPZ52_15675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
ABC1_cyano_C
Motif
Other DBs
NCBI-ProteinID:
QDY71294
UniProt:
A0A5B8J063
LinkDB
All DBs
Position
unnamed3:137113..139092
Genome browser
AA seq
659 aa
AA seq
DB search
MITPLAEALSERGFDTLTPVQAAVIDPELTASDLLVSAQTGSGKTVAFGLAIASTLLGAE
DRFGLAAAPLALVVAPTRELAFQVMRELSWLYARTGAVVTSCVGGMEMREERRALNRGAH
IVVGTPGRLRDHIERGSLDLSSLRAVVLDEADEMLDLGFREDLEFMLDSAPETRRTLLFS
ATVPPAIAKMAQRFQRDARRIDTIGRSDQHADITYQALRVSASDSENAIFNLLRYHHDQT
AIVFANTRAAVNHLMARLANRGLATVCLSGELSQSERTHALQAMRDGRARVCVATDVAAR
GIDLPNLSLVIHADLPTNTESLLHRSGRTGRAGRKGISALIVPPKAVKKAERLLKWAKIS
ASWIVAPSVDEILQKDEERLLTDPAWDEPLTEQQSLFASKLLEQQSPESIAAAYLRLYQE
RHAAPEELLPPDTKPSVREPRDFGPSRWFTLSVGRDDNAEARWILPLLCRAGSLDKAAIG
AIRVQDAETFVELSEPRAEGFLAAIGEEGVLEEGISVRALDSPPELPMRRADKRDGAATA
RRDHTERRKPTHRRENADKPDQPAGRAPYKAKGDKKTPAKTSRSDVGSNRSERAVPNVKK
PKKARGDGADGVQSSRTAAARDTSKRFTPPGKTKSPSKKPRNASSKRGGGSQPPRRGKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcctttagccgaagctctgtccgagcgtggtttcgacacgctgactcctgtt
caggcagccgtcattgatccggagctgacagcttccgatcttctggtgtcggcccagaca
ggttcagggaaaaccgtagctttcgggctggctattgcatctacgctgttgggggcagaa
gatcggtttggtttggcggcggcgccgcttgcgcttgtcgtcgcgcctacgcgggaactc
gcctttcaggtgatgcgtgaactgtcatggctttacgctcgcaccggtgcggtcgtgacg
tcctgcgttggtggtatggaaatgcgggaagaaagacgggccctcaaccggggggcgcac
atcgtcgtgggcacacccgggcggctgcgcgaccacatcgagcgtggttcgctcgatttg
agcagcttgcgtgcagtcgtactagatgaagcggacgagatgttggatctgggttttcgt
gaggacctggaattcatgctggacagtgcaccggagacccggcgaacgctcttgttttcc
gccaccgtcccacccgcgatcgccaagatggcacagcggttccaacgagatgcgcgccgg
atcgacacgattggcaggtccgatcagcatgctgacattacgtatcaggcgttgcgtgta
tctgcgtcggactcagagaatgccatcttcaacctgcttcggtatcatcacgaccaaacc
gcgattgtatttgcgaacacccgtgcagcagttaaccacctgatggcgcgtttggcgaac
cgcggtctcgccacggtgtgcttgtcgggagagcttagccagtccgagcgcacccatgcg
ctgcaggccatgcgcgacggtcgtgcgcgggtatgtgtggcgactgatgtggctgcacgg
gggatcgatttgccgaaccttagcttggtcattcatgctgatttgccaaccaatacggaa
agccttctgcatcgatccggacggacagggcgtgcgggacggaagggcatttctgcgctg
atcgtaccgcccaaggctgtgaaaaaggcagaaagattactaaaatgggccaagatttca
gccagttggattgttgcgccgtctgttgatgaaatcctgcaaaaagacgaagagcgcctt
ctgaccgatcccgcatgggacgagccattgaccgagcagcaatcgctgttcgcctcgaag
ctgttggaacagcaaagccccgagtctatcgcggccgcttatctgcgtctgtatcaggaa
cgtcatgctgctccggaagaattgctgccgcctgatacaaagccgtcggttcgagaaccc
cgggacttcggcccaagtcgctggttcaccttatcagttggccgagatgacaacgccgaa
gcccgttggattttgccattgctctgcagggccggcagtctcgacaaggcggcgatcggt
gccatccgggtacaagacgctgaaacctttgtcgagttgtcagaaccaagggcagaggga
ttccttgcggcgatcggcgaggagggggtgcttgaggaagggatctcggtaagggcattg
gacagccctcccgaactgccaatgcgccgtgcagacaaacgagacggcgcggcgaccgca
cgtcgtgatcacaccgagcgccgtaagccgacacaccgcagggagaatgcggataagccc
gatcaacctgcggggcgcgcgccctacaaagccaaaggcgacaagaagacaccggcgaag
acgtctaggtcagacgtgggatcaaaccgttccgaacgagctgtgccaaatgttaaaaag
ccgaagaaagcgcgtggagacggggcagatggcgtacagtcctccagaacagccgccgcg
cgcgatacgtccaaacgttttacaccgccgggaaaaaccaaatcgccctcaaagaaaccg
cgcaacgcctcttcgaagcgcggtggaggaagccaaccaccaaggcgtggaaagaagtag
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