Qingshengfaniella alkalisoli: FPZ52_16310
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Entry
FPZ52_16310 CDS
T06129
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lit
Qingshengfaniella alkalisoli
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lit03016
]
FPZ52_16310
Enzymes [BR:
lit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FPZ52_16310
Transfer RNA biogenesis [BR:
lit03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FPZ52_16310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QDY71301
UniProt:
A0A5B8J2C2
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All DBs
Position
unnamed3:complement(286793..287404)
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AA seq
203 aa
AA seq
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MANHLYQNDLPDGLDLGPVVAIDCETMGLNPHRDRLCVIQMSDGDGNAHLVQVAKGQTAA
PNLSRMLTDPEVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASKLVRTYTDRHGLKNLL
SELIDIDISKQQQMSDWGAPELTDAQLSYAASDVLYLHALRDKLNERLEREGRMELAQSC
FDFLPTRAVLDLQGWPEQDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtggccaatcacctttatcaaaacgatcttcctgatgggctggatcttgggccggttgtc
gcgattgactgcgaaaccatggggctgaacccgcatcgggacaggctgtgcgttatccag
atgtctgacggtgacggaaacgcgcatctggtgcaggtcgccaaggggcagactgcagcc
cccaacctgtcgcgtatgttgaccgatcccgaagtgctgaagctgttccatttcgggcgc
ttcgacattgccgcgatgtatcatgccttcggtgcgctggccgcgccggtctattgtacc
aagatcgcgtcaaagctggtgcggacctacactgatcgtcatgggctgaagaacctgctg
tcggaactgatcgatatcgacatttccaaacagcagcagatgagtgactggggcgcgccg
gaactgacggacgcgcaactaagctacgccgcatccgatgtgctgtatcttcatgcgttg
cgtgacaagctgaacgaacgactggaacgggaaggacgcatggaacttgcgcagtcctgt
ttcgattttctacccacgcgtgccgttctggatttgcagggctggcctgagcaggatatt
tttgcgcactga
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