Lysinibacillus irui: OU989_03200
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Entry
OU989_03200 CDS
T09550
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
liu
Lysinibacillus irui
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_03200 (addB)
Enzymes [BR:
liu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OU989_03200 (addB)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OU989_03200 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WDV07504
UniProt:
A0AAJ5RV97
LinkDB
All DBs
Position
673184..676693
Genome browser
AA seq
1169 aa
AA seq
DB search
MTLRIVSGRSGTGKSAFIHQEIVEQLKTDPLGHPIFIIVPDQMSYSTEYELTNKHGLQGL
IRAQVMTFKRLAWLVLQETGGIARKEVNGYGYRMLIRKLLEEQKSEFSLFRQAAGKRGFT
EEIEALLKEFSRYSVNSSVLAEVTESLKALDAPNTLQAKTNDLHVVLQALEERLGTTYVD
SEGYYPILTEQLKYAETMKQATIYIDGFTAFTVRELELVRELLKVTKQVTVVLPFDHIDE
AFDEQALFHEAALTNQRLHDIANEEGIDVDFPLHFYHARRFHSDDLQHVEANFANLMSKT
KETSGDVMVLEASNRRAEVHAIAREITKLTKEDGYRYQDIVLLYRQADLYDPLITSIFQQ
YDIPIFTNTKKSMLHHPLIELSRSALEIMTSNWKYEPVFRSVKTDLFFPLQAELTIWRER
ADRLENYCLAQGIYGERWFEEARWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDEIRQP
LKNLQDKLEAAQTGREIATALFELVEALQVYDKLQAMKDRELDRGDALAASEHDQAWNEW
IAVLDQFVYMFGEQEMTVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLARLSNIKVA
FVVGMNDGIYPTRMEYEGLLSDSEREWFSQIGYELAPTSTNRLLQENFLIYRAVTTPSNK
LYLSYPTADEEGKALLPSLYIKKIIGNDKAPGLFSDVAIERVVIDPIELLDGDVLPYLRH
PRTALAHLMIQLRQAEHSRELAPEWLALQKFYKQDPYWTLIFERVRYPITHKNEAEPLET
YITQELYGQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAMGDLFHEALKWI
TEETHRQQLSWIRLTKQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQRKLIRIVERTM
TALTQHANVSHFKPIAIEASFGPGQHEQLPPLEIDLTGGKKMFMRGRIDRVDSATIDDRS
YLRIVDYKSSARDLDLNEVYYGLSLQVLTYLDVAMENSSYWLPGQTEPAGVLYVHVHNPM
LKLDKDLTDSEIEEDRLKQYKMKGLLSENAEAILSMDEQLEESSGHSKIIPVYMKKDGTP
SESQSRIVPVNDMKKLQHFVRRKHQEAGNGILSGDTAISPYKLKAKTACDYCQFAAVCQF
DPSDGKQSYRQLMQAKPNDIVDKIRKEVE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacattacgtattgtttcaggacgatcgggaacagggaaatcggcatttattcatcag
gaaattgttgaacaacttaagacggatccattagggcatccaattttcatcattgttcct
gaccagatgtcctattctacggaatatgagctgacgaataagcatggtttacaaggtttg
attcgggcacaggtgatgacatttaagcgtttagcgtggttagtcttacaggagacaggt
ggtatcgcacgtaaagaagtaaatggctatggttaccgaatgctcattcgtaaacttcta
gaggaacagaaaagtgagttttctttattccgacaagcagcaggaaaacgaggttttaca
gaggaaatagaagcccttctaaaagaatttagtcgctatagcgtcaatagttccgtcttg
gcagaagtaacggaatctttgaaggcacttgatgctcccaacaccttacaagcaaaaacg
aatgatttacatgtcgttttgcaggcattagaggaacgacttggtacaacatatgtcgac
agtgagggctattaccctattttaacagaacaattgaagtatgctgaaacgatgaagcaa
gcgacaatttatattgatggttttacggccttcactgtacgagaattagaattagttcga
gagttattaaaggtaacgaagcaagtaactgttgttcttccttttgaccatatagatgag
gcttttgatgagcaggcactatttcatgaagcagctttaacaaatcaacgactccatgat
atcgctaatgaagagggcattgatgttgattttccattacatttttatcatgctagaaga
tttcattctgatgatttacagcatgtagaggctaattttgctaatttaatgtctaaaacg
aaagaaacctcaggagatgtcatggtacttgaagcatcaaatcgtcgagcggaggtacat
gcgattgcccgggaaataactaaattgacaaaagaagacggatatcgctatcaggatatt
gtacttttatatagacaagcagatctctatgatccacttatcacaagtattttccaacaa
tatgatattcctattttcacaaatactaaaaagtcgatgctacaccatccattaatagag
ttaagtcggtctgcattagagatcatgacatctaattggaagtatgaaccggtctttcgc
agtgtaaaaaccgatttgtttttcccgctccaagctgaactaacaatttggcgcgaacga
gcggatcgattggaaaactattgtttggcacaggggatctatggcgaacgttggtttgag
gaggctcgttggttttataaaaagtatcggggactagaattccattcacgtgtacaaaca
gatgaagagcgtgcaatgcaggcagaaatcgaggctattcgagatgaaattcgccaacca
ttaaagaatttacaggacaagcttgaagctgcgcaaactggtagggaaattgccactgcc
ttatttgaactagtggaggcattacaggtttatgacaagcttcaggcgatgaaagaccgt
gagcttgatcgaggcgacgctttagcagcgagtgagcacgaccaagcttggaatgaatgg
attgcagtcctcgatcaattcgtctatatgtttggtgagcaggagatgactgtggaggaa
gcagccaaaattcttgatgaaggctttgatacattagaattttctcgaattccaccaacc
ctagatgaggtcatggtagcgactgttgatttggctcgtctttctaatataaaggttgcc
tttgttgtagggatgaatgatggtatttatccaacacgaatggaatatgagggcttattg
tcagattcagagcgtgaatggtttagtcaaattggctatgagcttgcaccaacctctacc
aatcgtttattacaggaaaatttcttaatctatcgtgcagttacgacaccttctaataag
ctttatttgtcgtatccaacagcagatgaagagggaaaggcactgctaccttctttatat
atcaagaaaataattggtaatgacaaggcgccaggtctatttagtgatgttgctatagag
cgagtggttattgatccgattgaattactggatggagatgttttaccttatttacgccat
ccacgtaccgcattagcccaccttatgatacagctacgtcaagcagagcatagtcgtgaa
ttagcacctgaatggctagcattacaaaaattttataaacaagatccttattggacactt
atttttgagcgtgtacgctatccgattacacataaaaatgaggctgagccacttgaaacc
tatatcacacaggagttatacggacaaaagcttacatcaagtgtgtcacgaatagagaaa
tattttagatgtccattttctcatttcactacgtatggtctacgtttagaagagcgtgca
gagtatcgcttggaaacttttgcaatgggtgatttattccatgaggcgttaaagtggatt
acagaggaaacacatagacaacagctttcatggatacgtttgacgaagcagcaaattaaa
caattagcacggcaagcagtcgagcaaattgtacctgttttttcacatcaaatcttatta
tctagtgcccgctatcgctatattcagcggaagcttattcgtattgttgaacgcacgatg
acggcattgacacagcatgctaatgtatctcattttaaacctattgccattgaggcatcg
tttggcccagggcaacatgaacagctaccaccacttgaaattgatttgactggtgggaag
aaaatgtttatgcgaggacgtatcgatagagtggatagtgcaacgatagatgatcgctct
tatttgcggattgttgattataaatcttcagcccgtgatttagatttaaacgaggtttat
tatggattatctttacaggtccttacttatttagatgtggcgatggaaaatagctcttat
tggttaccaggtcaaacagagccagcaggggtactgtatgtgcatgtgcataatccaatg
ctaaaactagataaggatttaacggatagtgaaatagaagaagatcgtttaaagcaatac
aaaatgaagggcctactttcagaaaatgctgaggccattttatcgatggacgagcaacta
gaagaaagtagcggccactctaaaatcattcctgtttatatgaaaaaagatgggacacca
tctgaatcacaatcacgtattgtcccagtaaatgatatgaaaaagctacagcatttcgtt
cgtcgtaaacatcaggaggcaggcaatggtattttgtctggtgatacagctatcagcccc
tataaattaaaggcaaaaacagcatgtgattattgtcaatttgctgcagtttgtcaattt
gatccgtctgatggtaaacaaagctatcgtcaattgatgcaagcgaaaccgaatgacatt
gttgataaaattcggaaggaggtagaatag
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