Lysinibacillus irui: OU989_12840
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Entry
OU989_12840 CDS
T09550
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
liu
Lysinibacillus irui
Pathway
liu00630
Glyoxylate and dicarboxylate metabolism
liu00680
Methane metabolism
liu01100
Metabolic pathways
liu01120
Microbial metabolism in diverse environments
liu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OU989_12840 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
OU989_12840 (fdhF)
Enzymes [BR:
liu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
OU989_12840 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
NADH-G_4Fe-4S_3
Fer4_6
Fer4_7
Fer4_2
Fer4_10
Fer4_8
Fer4_21
Fer4_9
Fer2
Fer4_16
Fer4_15
ThiS
Fer4_18
Fer4_4
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
WDV05198
UniProt:
A0AAJ5RH22
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All DBs
Position
2522084..2525020
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AA seq
978 aa
AA seq
DB search
MTQIKINGVSYDVKEGATILDTINQHDIPHPQICHVPAVDPIETCDTCIVEVNGQLVRSC
STKAVDGMDVYLTSDKAKAAQTEAMDRLLENHLLYCTVCDNNNGNCALHNTAELMEIEHQ
KYPYKPKVEPHEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAERPRVIWD
TGVAINDSSCVSCGQCVTVCPCNALMEKSMLGEAGFMTGLKQDMLDPMIHLIKEVEPGYS
GIFAVSEVEAAMRSKRTKKTKTVCTFCGVGCSFEVWTKGRKILKVQPSDGPVNAISTCVK
GKFGWDFINSEERITKPLIRKNEEFVESSWDEALDLIASKLGGIQQQYGPGSVGFISSSK
ITNEENYLIQKMARQLFETNDVDNCSRYCQSPATDGLLRTVGMGGDAGTIQDIAKAGLVI
IVGANPAEGHPVLATRVKRAHKLHGQKLIVADIRKHEMAERSDIFMRPKQGTDQVWLMAV
TKYMIDQGWHDEAFIRENVLHFSDFTQVLEKYTLDYAQEMTGISKETLIQVAEMIRDADG
TCVLWGMGVTQNTGGSYTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGACDMGTLPNL
LPGYQKVTDDEARAKFEKAYGVPIQSQPGRNNMQMLDAIMEGKMKAMYLVGEDMALVDCN
ANHVDEVLSQLDFFVVQDCFLSRTAQYADVILPAAPSLEKEGTFTNTERRVQRLYQALPT
LGESKADWEILQAVARRLGADWQYNHPSDIFDEMASLSPLFSQANYDVLEGWGSFCWGSH
DGKDTPLLYEDGFNFPDKKARFALNDWVQPVEFEAQYDCLINNGRMLEHFHEGNLTNKSK
GIQSKVPEIFVEVSPELAKERGIADGALLRLVSPYGALKLNALVTDRVQGNELFLPMNSV
SKDSAINFLTGPAADVNTSTPAYKQTKVRVEVLKAKGKSPLPRTNPRYKKRHPQNGVEVQ
RKWNRPGYVHLTTTNERE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaaattaaaattaatggcgtatcgtatgatgtaaaagaaggagctacaatcctt
gataccattaatcaacatgacatcccacatcctcaaatatgtcatgtaccagctgttgat
ccaattgaaacatgtgatacatgtatcgtagaggtcaatggccaattagttcgatcctgc
tccacaaaggcagtagacggcatggatgtttacttaacttcagacaaagcaaaagcagca
caaacagaagcaatggaccgtctactcgaaaaccatttattgtactgtacagtttgtgat
aacaacaatgggaattgcgcgttacacaacacagctgaattaatggaaatcgaacatcag
aaatatccttataagccaaaagttgaacctcatgaggtagacatgtcacatccgttttac
cgctacgatcccaaccaatgtattgcttgtggtcaatgtgtggaggtttgtcaaaattta
caggtaaacgaaacattatctcttgattgggaggctgaaagaccacgcgttatttgggat
acgggtgttgcaatcaatgattcttcctgtgtaagttgcggtcaatgtgtaaccgtttgt
ccatgtaatgccttaatggaaaaatcgatgcttggagaagctggatttatgacaggtctt
aaacaggatatgttggaccccatgattcatttgattaaggaagttgaacctggctatagt
ggtatttttgccgtttctgaagttgaagcagccatgcgcagtaaacgtactaaaaaaaca
aaaacagtctgcacgttctgtggtgtcggttgctcatttgaagtttggacaaaaggacgt
aaaattttaaaagtacaaccatctgatggtccagttaatgccatttctacttgtgtcaaa
ggtaaattcggctgggacttcattaattcagaggagcgtattacaaaaccacttatccgt
aaaaatgaagagtttgttgaatcgtcatgggatgaagcactagatttaattgcctctaag
ctcggcggtattcagcaacaatatggccctggttctgttggctttatttcttcgtctaaa
attacgaacgaggaaaattacttaattcaaaaaatggcgcgtcaattattcgaaacaaac
gacgtggataactgttctcgctattgtcaatcccctgctactgacggtttattacgtact
gttggtatgggtggtgacgctggtactattcaagatattgccaaagctggtcttgtcatt
attgttggcgctaaccctgctgaaggacatcccgttctggcgacacgtgtgaaacgtgca
cataaattacatggtcagaagttaatagttgcggatattcgtaaacatgaaatggcagaa
cgatcagatatctttatgcgtccgaaacaaggtactgaccaagtttggttaatggctgtt
actaaatatatgatcgatcaaggttggcacgatgaggcctttattcgagaaaacgtcctt
cattttagtgattttacacaagtactggaaaaatacacactcgattacgcacaagaaatg
acaggtatttctaaagaaacattgattcaggttgctgaaatgattcgtgatgcagatggc
acttgtgttctttggggtatgggtgtaacacaaaatacaggtggctcttatacatcagcc
gctatatcgaatctattattagcaactggtaactatcgtcgaccaggtgcaggtgcctac
cctcttcgtggtcataacaatgttcaaggtgcatgcgatatgggtacactaccaaattta
ttgccaggctatcaaaaagtaacggatgacgaggcacgtgcaaaatttgaaaaagcctat
ggtgtccctattcaatcacaaccaggtcgaaataatatgcaaatgctagatgcgatcatg
gaagggaaaatgaaagcgatgtatttagtaggtgaggatatggcgcttgtagactgtaat
gccaaccatgtcgatgaggtgctgtcacaactagacttttttgtggttcaagattgtttc
ctttcacgaacagcacaatatgcggatgtcatattacccgctgcgccttcattagaaaaa
gaaggtacattcacgaacacggaacgtcgcgtgcagcgtctatatcaagctttaccaaca
cttggtgaatcaaaagccgattgggaaattcttcaagcagttgctcgtcgtttaggtgca
gattggcaatataaccacccaagtgacatttttgatgaaatggctagcttgtctccccta
ttctctcaagccaactatgatgttctagaaggctggggtagcttctgttggggtagtcat
gatggaaaagatacacctttattatatgaagatggctttaacttcccagataaaaaagct
cgctttgctttaaatgattgggtacaacctgttgagtttgaggcacagtatgattgtctt
attaacaatggtcgtatgcttgagcacttccatgaggggaacctaacaaataaatcgaaa
ggtattcaatcgaaggtacctgaaattttcgtggaagtgtcaccagaattagcgaaagaa
cgaggcattgcagatggcgccctactgcgattagtgtctccatatggtgcattaaagcta
aatgctcttgtcacagatcgggtgcaaggaaatgaattatttttaccaatgaactcggta
agcaaagattcagccatcaacttcttaacgggccctgcagcagatgtgaatacatccaca
ccagcctataagcaaacaaaggtacgcgtagaagtgttaaaagcaaaaggaaaatcacca
cttccacgcacaaatccacgctataaaaaacgtcatcctcaaaacggtgtggaggtacaa
cggaaatggaatcgtcctggctacgttcacttaacaactactaacgaaagagagtga
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