Lysinibacillus irui: OU989_14790
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Entry
OU989_14790 CDS
T09550
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
liu
Lysinibacillus irui
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liu03019
]
OU989_14790
03009 Ribosome biogenesis [BR:
liu03009
]
OU989_14790
Enzymes [BR:
liu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OU989_14790
Messenger RNA biogenesis [BR:
liu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OU989_14790
Ribosome biogenesis [BR:
liu03009
]
Prokaryotic type
rRNA helicases
OU989_14790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
DUF7117
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WDV09121
UniProt:
A0AAJ5RNA7
LinkDB
All DBs
Position
complement(2914551..2915852)
Genome browser
AA seq
433 aa
AA seq
DB search
MSKYTDYNFQPFLQDAIAKLGFTEPTPIQKEIIPLLLKGKSAIGQAHTGTGKTHSFLIPI
VQRIDVERQEVQAVITSPTRELAQQIFDALNQLIEGTAIQAKLFIGGTDKQRSIDKLKTQ
PQIVVGTPGRIRDLVSAQALFVHTAPILVVDEADLAFDMGFIEDIDGFASQMPEKLEMFV
FSATIPEKLQPFLKKYMDAPVHIQMNDKRPVAEGIDFVLVPVRSKSRNKRLLEVIEGINP
FLAVIFTNTRKTAEQVAGYLNEHGIRCGQIHGDLSPRDRKKMMKQIRDLEYQYIVATDLA
ARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFEPSDEDAVVRVEKMGI
PFVQKDVKNGEWSELKERHARKNRVKQENEIDVKAKALVRKPKKVKPGYKRNMKWEMEKI
KKRERRLKARGKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatactgattacaattttcagccatttttgcaggacgccattgcaaaacta
ggctttacagaaccgacaccaattcaaaaagaaattattccacttttattaaaagggaaa
agtgctattggacaggcacatacaggaacggggaaaacacatagttttttaattccgata
gttcaacgtattgatgtagagagacaggaagttcaggctgttattacttctcctacacgc
gaactagcacaacaaatatttgatgcgttaaatcagttaatagaaggaacagctattcaa
gcaaagctatttattgggggtacggacaagcaacgctccattgataaattaaaaacacaa
ccacaaatagttgttgggacacctggacgtattcgtgatcttgtttcagcacaagcgtta
tttgtgcatacggcaccaatcctagttgttgatgaagctgatttagcttttgatatgggc
tttatcgaggatattgatggatttgcttctcaaatgccagagaagcttgaaatgtttgta
ttctctgcaacgattcctgaaaaacttcagcctttcttaaaaaaatatatggatgcccca
gtgcatatccaaatgaacgataagcgaccagtggcagagggtattgattttgtgcttgtg
ccagtacgctctaaatcgcgtaataaacgtttattagaagtaattgaaggtattaatccg
tttttagctgttatttttactaatacacgtaaaacagctgagcaagttgccggttattta
aatgaacatggtatccgttgtggacaaatccatggtgatttaagtccacgtgatcgtaaa
aagatgatgaaacaaatccgcgatctagaatatcaatacattgttgcgactgatttagca
gcacgtggtatcgatattcaaggaatttcccatgttatcaattacgaaattccagaggac
ctagaattctttattcaccgtgttggacgtacagcccgtgcaggtaataaaggaactgcc
attactttatttgagccatctgatgaagatgcagtagttcgtgtagagaaaatgggtatt
ccttttgtgcaaaaagacgttaaaaatggagaatggtctgagttaaaagagcgtcatgcg
cgtaaaaatcgcgtgaaacaagagaatgaaatcgatgtgaaagcgaaggcattggtgcgt
aagcctaaaaaggttaaaccaggctataagcgtaatatgaaatgggaaatggaaaaaatt
aaaaaacgtgaacgtcgtttaaaagcgcgaggtaaaaaatag
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