Lysinibacillus irui: OU989_15170
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Entry
OU989_15170 CDS
T09550
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
liu
Lysinibacillus irui
Pathway
liu03030
DNA replication
liu03430
Mismatch repair
liu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OU989_15170 (holA)
03430 Mismatch repair
OU989_15170 (holA)
03440 Homologous recombination
OU989_15170 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liu03032
]
OU989_15170 (holA)
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_15170 (holA)
Enzymes [BR:
liu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OU989_15170 (holA)
DNA replication proteins [BR:
liu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OU989_15170 (holA)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OU989_15170 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WDV05636
UniProt:
A0AAJ5UQI1
LinkDB
All DBs
Position
complement(2993339..2994352)
Genome browser
AA seq
337 aa
AA seq
DB search
MISTVWNTIKKGELAPVYLLVGEESYFIDETIKRLKKAMGPEEELEMTTFDLDEMPVDAV
MDEADTIPFFSERKLIIAKNASFLKATEKGKEKIDHDVKRLETWLSNPSDFSVTVFIAPY
EKLDERKKVTKMMKEHALLVQAETPKEQDLAVWIQGIVKAQGNSITQDAIELLMTMMVGA
NMLQLQMEIDKLTLYLGEGGEITSTLVEDLVAKTLEQDAFKMLNAYLANDSVGALSIYHD
LLRQKQEPIMLVGLLASNVRTMSNVFYLLKKGYHPQQIAKNLKIHPYRVKLMVEQRNRPS
EESLLRALYQLAEVDLQLKSTSGNRERFLELFLLRQL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaacggtttggaatacaataaaaaaaggtgagctggcaccagtatatttactt
gttggtgaagaaagctattttatagatgagaccatcaagcgtttaaaaaaagcgatgggc
ccagaagaagagctagaaatgacaacatttgatttggatgaaatgccagtagatgctgtc
atggatgaagcagatacaattcctttcttctcagaacgaaaattgattattgctaaaaat
gcctcttttttaaaggcaaccgaaaaagggaaggaaaaaatcgatcatgatgtgaagcgt
ttagaaacgtggttatcgaatccatccgatttttcagtaactgtatttattgccccatat
gaaaaattagatgaacgtaaaaaagtaaccaaaatgatgaaagagcatgcgttacttgtg
caagcagaaacaccaaaggaacaggacttagcggtgtggattcaaggcattgtgaaagca
cagggcaatagcattacacaagatgcaattgaactgcttatgacgatgatggttggagcg
aacatgctacaattacaaatggaaattgataagctaaccctttatttaggtgagggtggt
gaaattacatctactttagtggaggatttagtggccaaaacattggagcaagatgctttt
aaaatgctcaatgcttatttggcgaatgattctgtcggagccttgtctatctatcatgat
ttattacgacaaaaacaagaacctattatgttagttgggttactcgcatccaatgttcgt
acaatgtcgaatgttttttatttgttgaagaaaggatatcatccgcaacaaattgctaaa
aatttaaaaatacatccgtatcgtgtcaaattaatggttgagcagcggaatcgaccgtca
gaagaaagtttgttaagagccttatatcagttagcagaggttgatttacaactgaaatcg
acaagcggtaaccgagaacgctttttagagcttttcttattacgtcaactttaa
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