Lysinibacillus irui: OU989_15515
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Entry
OU989_15515 CDS
T09550
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
liu
Lysinibacillus irui
Pathway
liu03410
Base excision repair
liu03430
Mismatch repair
liu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OU989_15515 (recJ)
03430 Mismatch repair
OU989_15515 (recJ)
03440 Homologous recombination
OU989_15515 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_15515 (recJ)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OU989_15515 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OU989_15515 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OU989_15515 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDV05703
UniProt:
A0AAJ5RLZ9
LinkDB
All DBs
Position
complement(3061138..3063459)
Genome browser
AA seq
773 aa
AA seq
DB search
MILSKKRWQVERPDATLVQTLQNDLQLSAIAAKILAARGCETTADAESLLNMTEANIHDP
FLMHGMAEAVARIEQALENGEKILVYGDYDADGVTSTTVMLNVLLDLGADVSFKIPNRFI
HGYGPHEALFREAYEEGVQLIITVDNGISGIEPIRVAKELGMDVIVTDHHEPGEELPPAD
IILHPRLPEGHYPFGELAGVGVAFKLAHALYGELPIHLIEFVAIGTVADLVPLVDENRYL
VKRGIQEMRRSLSPWVQAMCDIASTEQAKISEETIGFYFGPRLNAVGRLGEAAPGVELLM
AEDNAKAAALAKQLNACNTERKDIVKSITDEAIALIEADETIGNSLVLVVAGEGWNAGVV
GIVASRLVELYYRPTIVLSLDPDKGIAKGSARSIEGFHLYNELAKNRDILPHFGGHPMAA
GMTLSLEHVDELRRRLDAQARACLTEEHLTPIVHIDIPLSIDEISADAIEEISALGPFGT
DFPKPIYVLEDVEISSMRKIGAAENHIKMELTNGYDKLDSVGFNKGHLHDELTYGIKVSF
IGDLQINEWQGRKKAQFMIEDVQTTEWQLFDIRGIRQTARWLNTVPKDEAMFIAFRPETM
TYYQSLIGVPITVVDPTLSNVDQSDYIVLLDLPQNVQRLEEVLQKTKPSRIYAHFYMPDS
QYFSGLPTREQFAWFYKFLKNRPAFPLDMHIADLAKHTGWPLDALKFMTQVFFELGFVKM
ESGLTTVNVNAPKQALTEAPSYKQRSEQIEMEQKLVYAPYIELKQWFDERIHD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatcctatcgaaaaaaagatggcaggtggagcgtccagatgccacacttgtccaaaca
ttacaaaatgacttacaactttctgcgattgcagcaaaaattttagcagcacgtggctgt
gaaacaaccgctgacgcagaaagcttattaaatatgaccgaagcaaatattcatgatcca
tttctcatgcatggcatggctgaagcggtggcgcgaattgagcaagcactagaaaatggt
gagaaaatattagtctatggcgattacgatgcggatggtgtgacaagtacgactgtcatg
ctaaatgtgttattggatcttggtgccgatgtatcttttaaaatcccaaatcgttttatc
catgggtatggaccacatgaggctctatttcgagaagcctatgaagaaggggtacaatta
atcattacagtggataatgggatctcaggaattgaacctatccgagtagcgaaagagctt
ggcatggatgttattgtgactgatcaccatgaacctggggaggagctaccgccagcagat
attattcttcacccgcgattaccagaagggcattatccgttcggagagttagctggagta
ggtgtagcctttaagctagcacatgctctatatggagagctacccatccacttaattgaa
tttgttgcgattggcactgtagcagatttagtgccgctagtagatgaaaatcgctatctg
gtcaaacggggtattcaggaaatgcgtcgctcccttagtccgtgggtacaagcaatgtgt
gacatagcgagtacagagcaggcaaaaatttctgaagaaacgattggcttttattttggc
cctcgattaaatgctgttggtcgactcggagaagcagctccaggagtcgagttattaatg
gctgaggacaatgccaaggcagctgcgctggcaaaacagttaaatgcttgcaatacagaa
cgaaaagatattgtgaaaagcattacagatgaagctatcgcccttatcgaagccgatgaa
acgattggcaattccttagttcttgttgtggcaggggaaggctggaatgcaggggttgtg
ggcatcgttgcttctcgtcttgtggagttatattaccgtccaaccattgtcctttcactc
gatcctgataaagggatagctaaaggttccgcccgaagcattgaaggcttccatttatat
aacgaactagcaaaaaatcgggatattttgcctcactttggtggacatcccatggcagca
ggaatgaccttatcgttagagcatgttgatgaactacgtagacgtttagatgctcaagca
agggcctgtttaacagaggagcacttaacccctattgtccatattgatataccactaagt
attgatgaaatttcagcagatgctatcgaagaaatttcagcacttggcccatttggaact
gattttccaaagcctatttatgtactggaggatgtagaaatttcatccatgcgtaaaatt
ggtgcagcagaaaatcatattaaaatggaattaacgaatggctatgacaaattagatagt
gtcggttttaataaaggtcatttacatgatgagctaacgtatggcatcaaagtttccttt
ataggtgatttacaaattaacgaatggcaagggcgaaaaaaagctcaatttatgattgaa
gatgtccaaacaacagaatggcagctatttgatatccgtggaatccgtcaaacagctcgt
tggcttaatacagtgccgaaggatgaggcgatgtttatagcctttcgtcctgaaacgatg
acctattatcagtcattgattggtgtacctattacagtagtggaccctacactttcaaat
gttgatcaaagtgattatattgtgcttttagatttgccacaaaatgttcaaagattagaa
gaagtattacagaaaacgaagccttcacgaatttatgcgcacttttatatgccagattca
caatatttcagtggtttacctacacgagagcaatttgcttggttttataaattcctgaaa
aatcgaccagcatttccgcttgatatgcacatagctgatttagcgaagcatacaggatgg
ccattagatgcattaaaatttatgacacaggtgttttttgagcttggttttgttaaaatg
gagagtggactgacgactgtcaacgtgaatgccccaaaacaggcactaacagaggcaccg
tcttacaaacaacgttcagaacagattgaaatggagcaaaagcttgtctacgctccttat
atagaattaaaacaatggtttgatgaacgaatacatgactag
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