Lysinibacillus irui: OU989_16340
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Entry
OU989_16340 CDS
T09550
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
liu
Lysinibacillus irui
Pathway
liu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OU989_16340 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_16340 (mutM)
Enzymes [BR:
liu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OU989_16340 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OU989_16340 (mutM)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OU989_16340 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RBD_LARS1
Glrx-like
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-ProteinID:
WDV05857
UniProt:
A0AAJ5RJN9
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All DBs
Position
complement(3235150..3236022)
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVQALKPKIEGRTIQQVQLSERVRFSFSEGKQCIVKQAEPDAFELSLSHMT
ITKIERRAKYIFFHLMKDDVPYVLVSHLGMTGAWFVVNEPEEINEEKFQKHIHATFKMAD
GGYLIYSDIRRFGELRFLAKIEDHVPLTKMAPEPFDEHACEFFIAQSKLPKYENKAVKEV
IMDGQVISGCGNIYATEALFAQKVHPARKMNRISDKRKRALFEEIVAVLRQSIEAGGSTI
SDYRNINGEAGSMQNRLKMYGKKICPVCETVTSQMTIGGRTSVYCPNCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtggaaggtgtcgtccaggcattgaagccaaaaattgaagga
cggacaattcaacaagtacagctatctgaaagggtacgtttctcttttagtgagggtaag
caatgcatcgttaaacaagcagagccggatgcatttgaattgtctttgtcgcacatgaca
ataactaaaattgaacgacgagcgaaatatatattctttcatttgatgaaggatgatgtg
ccatatgtgcttgtcagtcatttaggcatgacaggtgcatggtttgttgtgaatgaacca
gaagaaatcaatgaggaaaaattccaaaagcatatccatgcaacatttaaaatggcagat
gggggatacttaatttattcggatattcgtcgctttggtgaacttcgatttttggcaaag
attgaagatcatgtgccgctaacaaagatggcaccagagccattcgatgagcatgcttgt
gaattttttatagcacaatctaaattaccaaaatatgaaaataaagctgtgaaagaggtt
attatggatgggcaagtcatctcgggctgtggcaatatttatgctacggaagcattgttt
gcccagaaagttcatcctgcacggaaaatgaatcgcattagtgacaaacgtaaaagagct
ttatttgaggaaattgttgctgtcctacgccaaagtattgaagcgggtggttcaactatt
tctgattatcgaaacattaatggggaagccgggagtatgcagaatcggctgaaaatgtat
gggaaaaagatatgtccagtatgtgaaacagtaacgagtcaaatgacaattggtggacgt
acctctgtttattgcccaaattgtcaacattaa
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