Lysinibacillus irui: OU989_16345
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Entry
OU989_16345 CDS
T09550
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
liu
Lysinibacillus irui
Pathway
liu03030
DNA replication
liu03410
Base excision repair
liu03420
Nucleotide excision repair
liu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OU989_16345 (polA)
03410 Base excision repair
OU989_16345 (polA)
03420 Nucleotide excision repair
OU989_16345 (polA)
03440 Homologous recombination
OU989_16345 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liu03032
]
OU989_16345 (polA)
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_16345 (polA)
Enzymes [BR:
liu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OU989_16345 (polA)
DNA replication proteins [BR:
liu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OU989_16345 (polA)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OU989_16345 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OU989_16345 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WDV05858
UniProt:
A0AAJ5RI77
LinkDB
All DBs
Position
complement(3236035..3238662)
Genome browser
AA seq
875 aa
AA seq
DB search
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYLRKLIDAYGIKQYEQELYEADDIIGTLAK
EASSQDMDVIIVSGDRDLTQLATEQVTVYITKKGITEIEKNTPAFIEEKYGLTPLQIIDM
KGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVEALYEAMDTLKTSKMKEKLVANEEQAIM
SKKLATIYTDAPITISLADLVYNGPNEEELMSVWRELGFKSLIEKSDFTVQEEEQAPFEY
ELVQEVKPEDLKDVMAVHVELENEHYHTCQQLGIALSDGTKTQYIPFDIAAKSDELRRWL
EDATKIKYMSDSKAAQAALKRAGIQLAGVDFDLLLASYINNPGLSGDDVATLARELGYYD
VQANETVYGKGAKRAIPNIDQLAQHVCRKAFAVWSLQPKLETLLKENEQFDLYKNLELPL
ARILGEMESEGITVNRATLEKMGHELNDKLIVIEQEIYAEAGEKFNINSPKQLGVILFEK
LGLPVIKKTKTGYSTAADVLEKLQSEHAIIEHILLYRQLGKLQSTYIEGLLKEIHESDSK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEDWILFSADYSQIELRV
LAHMSEDKNLVEAFREGMDVHTRTAMDVFHVAEDEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAAIFIEKYFASFPGVKQYMDDIVQDAKFNGYVTTILNRRRYLPDITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKEKMQAKLLLQVHDELIFEAPKEEI
ALLEKIVPEVMENAIGLSVPLKVDFNHGSTWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaaaattactattattggacggtaatagtttagcgtatcgcgcgtttttt
gcgttgccattgttaacgaatgatagtggcattcataccaatgctgtgtacggctttaca
acaatgctacaacgaatattagaggaagaacagccaacaaaaatattagtcgcttttgat
gctggaaaaacaacattccgccatgaaacgtttacggaatataaaggtgggcgacaaaaa
accccaccagaattatcagagcaattcccttatttacgcaagctaattgatgcctatgga
attaagcaatatgaacaagaattatatgaagcggatgatattataggaactctcgctaaa
gaggcatcatcacaggatatggatgtgattattgtatcgggagaccgtgatttaactcag
ttagcgacagagcaagtaacggtctatattacaaaaaagggcattacggaaattgagaaa
aatacaccagcctttattgaagaaaagtacggtttaacgccactacaaattattgatatg
aaaggcttaatgggagattcttcagataatattcctggagtaccaggtgtcggtgaaaaa
acagcagtaaaattattaaaagagcatggctccgttgaggcactttatgaggcaatggat
acgttgaagacctccaaaatgaaggaaaagttggtagctaatgaagagcaggccatcatg
agtaagaagctggcaacgatttatacagatgctccaattaccatttcacttgctgatctt
gtttataacgggccaaacgaagaagaattaatgagtgtttggcgtgagcttggctttaaa
tcactcattgaaaaaagtgattttacagtccaagaagaagaacaagcaccatttgaatat
gagttagtgcaagaagtaaaaccagaagacttaaaagatgtgatggctgtacatgttgag
cttgagaatgagcattatcatacatgtcagcaattaggaatcgctttatcagatggtact
aagacacaatatatcccgtttgatattgcagcaaaatcagatgaacttcgtcgctggtta
gaagatgcaacaaaaataaaatatatgtctgattctaaggcagctcaagcggcattaaag
cgagcaggtattcaattagcaggcgttgactttgatttgcttttagcctcatatattaat
aatcctgggctaagtggagatgatgttgccacactagcaagggagttaggctactatgat
gtccaagcaaatgagacggtttatggcaaaggagctaagcgtgcgattccaaacattgat
caacttgctcagcatgtttgtcgtaaagcttttgctgtgtggtcattacagccgaagcta
gaaacgttattaaaagagaatgaacaatttgatctttataaaaacttagaattaccattg
gcaagaattttgggcgagatggaaagtgaagggattacagttaaccgtgctacgttagaa
aaaatggggcacgagctgaatgacaaactaatagtgattgagcaggaaatatatgcagag
gctggagaaaagtttaatattaattcacctaaacaattaggggttattttatttgagaag
cttggtctacctgtgattaaaaagaccaaaacaggctattctacagcggctgatgtattg
gaaaaattacagtcggagcatgcgatcatcgaacatatcctattgtatcgacagcttggt
aaattacaatccacatatatcgaaggtttactaaaggaaattcatgaatcggatagcaag
gtgcatacacgcttccagcaagctttaactgcgacaggacgtctaagttctacagatcct
aatttacaaaatatacctatccgtttggaagaaggacgcaaaatccgtcaagcatttgtc
ccttcaaaagaggattggattttattttctgccgattattcgcaaattgaattgcgcgtg
ctggcacatatgtcagaagataaaaaccttgtagaggctttccgcgaaggcatggatgtt
catacgcgaactgctatggatgtattccatgtagcagaggatgaagtggatagtaatatg
aggcgtgctgcgaaggctgttaactttgggattgtttatggcatcagtgattatggacta
tcacaaaacttggatataacgcgtaaggaagccgcgatatttattgaaaagtatttcgca
agtttcccaggggttaaacaatatatggatgatattgtacaagatgcaaaatttaatggg
tatgtcacaaccattttaaatagacgtcgctatttaccagacattacaagctcgaatttt
aatttaagaagctttgcggagagaacggcaatgaatacaccgatccaaggtagtgccgct
gatattattaaaaaagcaatgattgatatggatgctcgcttgaaaaaagaaaagatgcag
gcaaaactacttctacaagtgcatgatgaattaatttttgaagctccaaaagaggagatt
gctttgctagaaaaaattgtaccagaggtaatggaaaatgccattgggctttccgtaccg
ctcaaagtagacttcaaccatggctctacatggtacgaagcaaaataa
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