KEGG   Lysinibacillus irui: OU989_16345
Entry
OU989_16345       CDS       T09550                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
liu  Lysinibacillus irui
Pathway
liu03030  DNA replication
liu03410  Base excision repair
liu03420  Nucleotide excision repair
liu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:liu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OU989_16345 (polA)
   03410 Base excision repair
    OU989_16345 (polA)
   03420 Nucleotide excision repair
    OU989_16345 (polA)
   03440 Homologous recombination
    OU989_16345 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:liu03032]
    OU989_16345 (polA)
   03400 DNA repair and recombination proteins [BR:liu03400]
    OU989_16345 (polA)
Enzymes [BR:liu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OU989_16345 (polA)
DNA replication proteins [BR:liu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     OU989_16345 (polA)
DNA repair and recombination proteins [BR:liu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     OU989_16345 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OU989_16345 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 NYN_YacP
Other DBs
NCBI-ProteinID: WDV05858
UniProt: A0AAJ5RI77
LinkDB
Position
complement(3236035..3238662)
AA seq 875 aa
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYLRKLIDAYGIKQYEQELYEADDIIGTLAK
EASSQDMDVIIVSGDRDLTQLATEQVTVYITKKGITEIEKNTPAFIEEKYGLTPLQIIDM
KGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVEALYEAMDTLKTSKMKEKLVANEEQAIM
SKKLATIYTDAPITISLADLVYNGPNEEELMSVWRELGFKSLIEKSDFTVQEEEQAPFEY
ELVQEVKPEDLKDVMAVHVELENEHYHTCQQLGIALSDGTKTQYIPFDIAAKSDELRRWL
EDATKIKYMSDSKAAQAALKRAGIQLAGVDFDLLLASYINNPGLSGDDVATLARELGYYD
VQANETVYGKGAKRAIPNIDQLAQHVCRKAFAVWSLQPKLETLLKENEQFDLYKNLELPL
ARILGEMESEGITVNRATLEKMGHELNDKLIVIEQEIYAEAGEKFNINSPKQLGVILFEK
LGLPVIKKTKTGYSTAADVLEKLQSEHAIIEHILLYRQLGKLQSTYIEGLLKEIHESDSK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEDWILFSADYSQIELRV
LAHMSEDKNLVEAFREGMDVHTRTAMDVFHVAEDEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAAIFIEKYFASFPGVKQYMDDIVQDAKFNGYVTTILNRRRYLPDITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKEKMQAKLLLQVHDELIFEAPKEEI
ALLEKIVPEVMENAIGLSVPLKVDFNHGSTWYEAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgactaaagaaaaattactattattggacggtaatagtttagcgtatcgcgcgtttttt
gcgttgccattgttaacgaatgatagtggcattcataccaatgctgtgtacggctttaca
acaatgctacaacgaatattagaggaagaacagccaacaaaaatattagtcgcttttgat
gctggaaaaacaacattccgccatgaaacgtttacggaatataaaggtgggcgacaaaaa
accccaccagaattatcagagcaattcccttatttacgcaagctaattgatgcctatgga
attaagcaatatgaacaagaattatatgaagcggatgatattataggaactctcgctaaa
gaggcatcatcacaggatatggatgtgattattgtatcgggagaccgtgatttaactcag
ttagcgacagagcaagtaacggtctatattacaaaaaagggcattacggaaattgagaaa
aatacaccagcctttattgaagaaaagtacggtttaacgccactacaaattattgatatg
aaaggcttaatgggagattcttcagataatattcctggagtaccaggtgtcggtgaaaaa
acagcagtaaaattattaaaagagcatggctccgttgaggcactttatgaggcaatggat
acgttgaagacctccaaaatgaaggaaaagttggtagctaatgaagagcaggccatcatg
agtaagaagctggcaacgatttatacagatgctccaattaccatttcacttgctgatctt
gtttataacgggccaaacgaagaagaattaatgagtgtttggcgtgagcttggctttaaa
tcactcattgaaaaaagtgattttacagtccaagaagaagaacaagcaccatttgaatat
gagttagtgcaagaagtaaaaccagaagacttaaaagatgtgatggctgtacatgttgag
cttgagaatgagcattatcatacatgtcagcaattaggaatcgctttatcagatggtact
aagacacaatatatcccgtttgatattgcagcaaaatcagatgaacttcgtcgctggtta
gaagatgcaacaaaaataaaatatatgtctgattctaaggcagctcaagcggcattaaag
cgagcaggtattcaattagcaggcgttgactttgatttgcttttagcctcatatattaat
aatcctgggctaagtggagatgatgttgccacactagcaagggagttaggctactatgat
gtccaagcaaatgagacggtttatggcaaaggagctaagcgtgcgattccaaacattgat
caacttgctcagcatgtttgtcgtaaagcttttgctgtgtggtcattacagccgaagcta
gaaacgttattaaaagagaatgaacaatttgatctttataaaaacttagaattaccattg
gcaagaattttgggcgagatggaaagtgaagggattacagttaaccgtgctacgttagaa
aaaatggggcacgagctgaatgacaaactaatagtgattgagcaggaaatatatgcagag
gctggagaaaagtttaatattaattcacctaaacaattaggggttattttatttgagaag
cttggtctacctgtgattaaaaagaccaaaacaggctattctacagcggctgatgtattg
gaaaaattacagtcggagcatgcgatcatcgaacatatcctattgtatcgacagcttggt
aaattacaatccacatatatcgaaggtttactaaaggaaattcatgaatcggatagcaag
gtgcatacacgcttccagcaagctttaactgcgacaggacgtctaagttctacagatcct
aatttacaaaatatacctatccgtttggaagaaggacgcaaaatccgtcaagcatttgtc
ccttcaaaagaggattggattttattttctgccgattattcgcaaattgaattgcgcgtg
ctggcacatatgtcagaagataaaaaccttgtagaggctttccgcgaaggcatggatgtt
catacgcgaactgctatggatgtattccatgtagcagaggatgaagtggatagtaatatg
aggcgtgctgcgaaggctgttaactttgggattgtttatggcatcagtgattatggacta
tcacaaaacttggatataacgcgtaaggaagccgcgatatttattgaaaagtatttcgca
agtttcccaggggttaaacaatatatggatgatattgtacaagatgcaaaatttaatggg
tatgtcacaaccattttaaatagacgtcgctatttaccagacattacaagctcgaatttt
aatttaagaagctttgcggagagaacggcaatgaatacaccgatccaaggtagtgccgct
gatattattaaaaaagcaatgattgatatggatgctcgcttgaaaaaagaaaagatgcag
gcaaaactacttctacaagtgcatgatgaattaatttttgaagctccaaaagaggagatt
gctttgctagaaaaaattgtaccagaggtaatggaaaatgccattgggctttccgtaccg
ctcaaagtagacttcaaccatggctctacatggtacgaagcaaaataa

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