Lysinibacillus irui: OU989_16440
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Entry
OU989_16440 CDS
T09550
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
liu
Lysinibacillus irui
Pathway
liu03030
DNA replication
liu03430
Mismatch repair
liu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OU989_16440 (dnaE)
03430 Mismatch repair
OU989_16440 (dnaE)
03440 Homologous recombination
OU989_16440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liu03032
]
OU989_16440 (dnaE)
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_16440 (dnaE)
Enzymes [BR:
liu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OU989_16440 (dnaE)
DNA replication proteins [BR:
liu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OU989_16440 (dnaE)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OU989_16440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WDV05875
UniProt:
A0AAJ5UU50
LinkDB
All DBs
Position
complement(3257074..3260157)
Genome browser
AA seq
1027 aa
AA seq
DB search
MTHVYTKMHTSADLLKSTIRLEQLIPFLQEQKTQACAIVNTKLYGLLPFCKALQQANIHA
VIGLSVNVQWQDHRIPVVLYAQTQEGYQHLLKISSAISIRHDEVLPWKWLEGYAAGCIAM
LSTSDFVDLTDWQEIITAFVQLFNHHFYMGIARPGGVKAPNEGDIVVWCEEQTIPLVATQ
SCYFLRPEDHFAYEVARAIDTGEKLGGTLLTADLQGYFAPTAYEWQNWFADRPEWLESSV
NMLASCTASIPEMPVQMPKYPLPVGETAESFLVSEAFSGLEKRLNQMAIPTVYQERLQHE
LEVICSMGFADYFLVVADFMRYAKENRILTGPGRGSSAGSLVAYSLFITQVDPLAYGLLF
ERFLNPERISLPDIDIDFVDSKRHQVIQYVAQKYGKANVAQIITFGTLSAKAVARDVARV
FSFEAETLEKISKMIPNKPGITLQRAVAESQDFQVWLAENEKHQQWLDVALKLEGLPRNS
STHAAGIVIAPSPLVNTVPIEEGHDGIYSTQWPMGDIEACGLIKMDFLGLRNLTILEQIR
WSIYKAGGPWIEFERIPMHDETTFQLLQRGDTSGIFQLESDGMKQALRDIQPSSFSDIVA
VNALYRPGPMDFIPVYARRKAGKEMVVMPHPVLEPILQETFGVIVYQEQIIKIASVLAGF
TMGQADLLRRAVSKKNRQVLEEQRASFVNGALKQGFDQHVAEEVYELIVRFADYGFPKSH
AVAYSIISYQMAYLKAHFPLSFYAALLSNATGNIEKIQHFVLEAKDKGILFYPPSLKNST
KYFTVENEGIRYSLSGIKGVPHTLIEKVTALRQSNPEALNNLFDLAVALSAQHFKPKVME
SLIFAGALDYLDKDRAILVNTIDAALKHAELLRPTEDIDMATAMAFNFGKPKYMQADEMP
QKEKLMHEKESLGFYISTHPVAQERHFWNDITCTCRELKQMRDGTLVKIIGIIEEVKKIR
TKKGEQMAFVHLQDEYGTVSITLFPQVFQVVQELLVEDEMLWVEGVIERRFGKPQIKVKH
AQTTKKV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
ttgacacatgtatatacaaagatgcatacgagcgcggatttattgaaaagcacaattcgg
cttgaacaattgattccttttttacaagagcaaaaaacacaggcctgtgcaatcgtaaat
acgaagttgtacgggcttttgcctttttgtaaagcgttgcagcaagcaaatatccatgcg
gtcatagggctttcggttaacgtacagtggcaggatcatcgtatacccgttgtactgtat
gcacagactcaagaaggctatcagcatcttttaaagattagtagtgctatttcaattaga
catgatgaagtattgccatggaagtggcttgagggatatgcagcaggatgtatcgccatg
ctttctacaagtgattttgtggacttaacggactggcaggaaataattactgcttttgtc
cagctatttaaccatcatttttatatgggaattgcacgacctggaggggtaaaagcacct
aatgaaggagatatagttgtttggtgcgaggaacagacaattccacttgttgccactcaa
agttgttattttttacgtccagaagatcactttgcttatgaggtggctagagcgattgat
acgggagaaaaactgggtggtacattgttaacggctgacttacaaggctattttgctcct
acggcatatgaatggcaaaattggtttgctgatcgaccagagtggttggagtctagcgta
aacatgcttgctagttgcacagctagtatccctgaaatgcctgtgcaaatgcctaaatat
cctttgcctgtaggtgaaacagctgaaagtttcttggttagtgaagcattttcaggattg
gaaaaacgcttgaatcaaatggcgattccgactgtctatcaggaaaggttacaacatgaa
ctggaagttatttgttcaatgggctttgctgactattttttagttgttgcagactttatg
cgttatgcgaaagaaaatcgtattttgactggacctggtcgtggttcctccgcgggttcg
cttgtggcctatagcctattcataacacaagtagatccactagcctatggtttattattt
gaacgatttttaaatcctgaaagaatctctttacctgatattgatatcgattttgtcgat
agtaaaaggcaccaggttattcagtatgttgcacaaaaatatggcaaagcgaatgttgcg
caaattattacatttgggacattgtctgcaaaagcagtagctagagatgtggcgagggtt
tttagctttgaggccgagacgttagaaaaaatctcgaaaatgattcctaataagccaggt
attactttacaaagggctgtggcagaatcacaagactttcaagtctggttagcggagaat
gaaaagcatcagcagtggttggatgtagcacttaaattagaaggactgccgagaaattcc
tccacacatgcagcgggtattgtcatcgctccatctccgttagtaaacactgtacctatt
gaagaaggacatgatggtatatatagtacacaatggccgatgggggatattgaagcgtgt
ggtctcattaaaatggactttttaggcttgcgcaatcttacgattttagagcaaatacgt
tggtcaatctataaagcgggaggaccctggatagaatttgaacgcatccctatgcatgat
gaaacaacgtttcaacttttacaacgtggagatacatcaggtatctttcaattagaatca
gatggaatgaaacaagctttacgggatattcaaccttcgagcttttcagatattgtcgcg
gtaaacgcactttatcgtccaggtccgatggattttatcccagtctatgctagacgaaaa
gctgggaaagaaatggttgttatgccccaccctgtattagagcctatcttacaagagaca
tttggcgttattgtttatcaagaacaaattataaaaattgcatctgttctggcgggcttt
acaatgggacaagcagatttgctacgccgtgcagtaagtaaaaaaaatcgtcaagtttta
gaggagcaacgtgcttcatttgttaatggtgcattaaagcaaggatttgatcaacatgta
gcagaagaagtatacgaactcattgttcgctttgcggattatgggttccctaaaagtcat
gctgtggcctatagtataatttcttatcaaatggcctatttaaaagctcattttccttta
agcttttatgcagcgttattatcaaatgcaacaggaaatatagagaagattcaacatttt
gtccttgaggcaaaagataaaggtatccttttttatccaccctcattaaaaaacagtacg
aaatattttactgtagaaaatgaaggtattcgctatagcttatcaggaattaagggagta
ccgcatactttgatagaaaaagtgactgctttacgtcaatcaaatccagaggcgttgaat
aatctttttgatttagctgttgccttaagtgcacagcattttaaaccgaaagtcatggaa
tcactcatttttgctggtgcgctagattacctcgacaaagaccgtgctattctagtcaat
accatagatgccgccttaaaacatgctgaactgttacggccgactgaagatatcgacatg
gcaacggcaatggcgtttaactttggtaaaccaaaatatatgcaggcagatgaaatgcct
caaaaggaaaaattaatgcatgagaaggaaagcttaggcttttacatttcaacacatcct
gtagcacaagaaaggcatttttggaatgatattacctgtacttgccgagagctgaagcag
atgcgtgatggaactttagtaaaaatcattggtataattgaagaagtgaaaaaaatccgc
acaaaaaaaggtgagcaaatggcttttgttcatctacaggacgaatatggtactgtttcg
attaccttattcccgcaagtttttcaagttgttcaggaattgttagtggaagacgaaatg
ttatgggttgaaggtgtaatcgagagacgctttggtaagccgcaaatcaaagtaaaacat
gcgcaaacgacaaaaaaggtatga
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