Lysinibacillus irui: OU989_20035
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Entry
OU989_20035 CDS
T09550
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
liu
Lysinibacillus irui
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liu03021
]
OU989_20035 (sigB)
Transcription machinery [BR:
liu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OU989_20035 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF134
HTH_37
Sigma70_ECF
HTH_3
DUF1492
HTH_28
GerE
KORA
HTH_50
HTH_Crp_2
NirdL-like_HTH
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WDV06490
UniProt:
A0AAJ5UV67
LinkDB
All DBs
Position
complement(3977862..3978647)
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AA seq
261 aa
AA seq
DB search
MSKESLHKSSSKEDVLKWIELYQSTEDDEAQTNLVIHYRYLVESIARKYSNGKSYYDDIV
QVGMLGLLGAIRRFDPNVGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKS
TVEALTIELQRSPSIKDIAERLEVAEEEVLEAMEMSRSYQALSMDHSIESDSDGSTVTLF
DILGREDDGYEITDKRMIVADALVVLNEREKQIIQLTYLEQLSQKEAGERLGISQMHVSR
IQRKAIKKLQEAILASGSVSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacataaatcttcatccaaggaagatgtactaaagtggattgaa
ttgtaccagtcaacggaggatgatgaagcacaaacaaacttagtgattcattatcgatat
ctagttgaatcaatagcacgtaaatattcgaatggtaaatcttactatgatgatattgtt
caagtagggatgctgggtttattaggtgcaatcagacgttttgatccgaatgttggtcgt
agttttgaggcatttgcggtgccaacgatagttggagaaattaagcgatttttacgtgat
aaaacatgggatgttcacgtgcctagacgaataaaagaactaggaccgagaatcaaatca
acggtggaggcgctgacaattgaactacagcgctctccttctattaaagatattgcagaa
cgcttagaggttgctgaagaagaagttttagaagctatggaaatgagccgtagttatcaa
gctctttctatggatcattcgatagagtcagattcagatggtagtacagtcacgttattc
gatattttgggtagagaagatgacggctacgaaataactgataaacgaatgatcgttgct
gatgcgctagttgtgttgaatgagagagaaaaacagattattcagcttacatatttagag
caacttagtcaaaaagaagctggagaacgattaggaatttctcaaatgcatgtatcaaga
atacaaagaaaagcaataaagaaattacaagaggctattctagcgagtggcagtgtttcg
ctctaa
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