Lysinibacillus irui: OU989_21990
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Entry
OU989_21990 CDS
T09550
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
liu
Lysinibacillus irui
Pathway
liu03420
Nucleotide excision repair
liu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OU989_21990
03430 Mismatch repair
OU989_21990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_21990
Enzymes [BR:
liu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OU989_21990
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OU989_21990
MMR (mismatch excision repair)
Other MMR factors
OU989_21990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
SLFN-g3_helicase
AAA_30
DEAD
PhoH
ResIII
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
WDV06854
UniProt:
A0AAJ5RMW5
LinkDB
All DBs
Position
4348119..4350422
Genome browser
AA seq
767 aa
AA seq
DB search
MENQKEWLEEKLYLEDSLNLIHHKIKEIQLKEKGFKENAVALKKTFWNDVRVNLDTAEDV
DETFFAIKQQVELLSDSELAQQRAIRNVKVYERLQQSPYFARIDFLQNGEKDPLKIYIGV
ATLLDEQDENIIIYDWRAPISSMYYDYTPGDASYETLGEEIHGEMLLKRQFIIKNGQLQS
MFNTGLTIGDDLLLDILAQNANEHIRSIVATIQAEQNKIIRHVNSRYLIVEGVAGSGKTA
VALQRVAYLLYRYRNEMTADQILLITPNQLFNQYVHTVLPDLGEDNMQQLTFIEYVEKRL
GRQFQLEYPYEQLEDLLTEKDDAHYETKLSIISYKASLDFKDLMDHYVSYLSNKGLLFKN
IVFRGERIITAQEISEYFYSFPSSISIPDRLQFVKEWLLQQLTKFERAERTKEWVEEATE
LLDKEDYSKSYSELLYEGSYTENSFDDFDQERQKLARQIVKKHFKPLRNSVTKLKFVHIL
GIYRQLFDQNSPFYKALQHLMPDHWEDICQHTHTNLTKRLIAYEDAAPFLYLQDKIEGQQ
TNTMIRHVLIDEAQDYSPFQLTVLQQLFPKARMTILGDGHQTIHPHTFENPSLLDPELYG
GQAEKMILTKSYRSTKQIISLTSNILNDGSEVEAFNRNGPEPSITIVPNELELVDRIIQN
INNLSTKFETIAVICKTTAECSAVYEQLRNQIDIQLITHSTKQFKKGILLLPAYMAKGIE
FDAVIIYNASAANYSRESERYYFYTACTRAMHELFIYSINKVTSFLQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatcaaaaagaatggctagaagaaaagctttatcttgaggattctttaaacctc
attcatcacaaaataaaagaaatacagctaaaagagaaaggcttcaaagaaaatgctgtc
gccttaaagaaaacgttttggaatgacgtcagggttaatttagatacggctgaggatgtc
gatgaaactttttttgccattaagcaacaggtagagcttttatctgactcagagcttgca
caacaacgtgcgattcgaaatgtgaaggtctatgaacgtttacaacaatcaccctatttt
gctcgtattgactttttacaaaatggggaaaaagatcccttaaaaatttatataggtgtt
gctacattattggatgaacaggatgaaaatataatcatatatgactggcgagcgcctatc
tcaagtatgtattatgattacacacctggcgatgcatcctacgaaacattaggtgaagaa
attcatggagaaatgttattaaaaagacaatttattattaaaaatggccaactacaatcg
atgtttaatacaggccttacaattggcgatgatttattgctagatattcttgcccaaaat
gcaaacgagcatattcgtagtatcgttgcaacgattcaagctgaacaaaataaaattatt
cgacatgtaaactcccgatacctcatcgtcgaaggtgttgctggtagtggtaaaactgcg
gtggccttacagagggtcgcctatctattgtatcgttatcgcaatgaaatgactgccgat
caaatattactaataacgcctaatcaacttttcaatcaatatgtccatacggtcttaccc
gatttaggtgaagacaatatgcaacaattaacttttatagagtatgtggaaaaacgatta
ggtcgtcaattccaattggaatacccttatgagcaactagaagatcttttaacagaaaag
gatgacgctcattatgaaactaaattaagtattatttcatataaagcgagccttgatttc
aaagatttaatggatcactatgtaagctatttatcgaataagggcttattatttaaaaat
attgtatttcgtggggaacgtattattactgcacaggaaatttcggaatacttctattcc
ttcccttcctctatatcgataccggatcgcctacaattcgtgaaagagtggttattacag
caactaacgaaatttgaaagagctgagcgtacaaaggaatgggtagaagaagcaactgaa
cttttagataaagaagactactctaagtcttacagtgagcttttatatgagggaagctat
acagaaaactccttcgatgattttgatcaagaacgccaaaaattagcgagacaaattgtt
aaaaaacactttaaaccgttacgtaattctgttaccaagttaaagtttgttcatatttta
ggtatatatcgccaactctttgatcaaaatagccctttttacaaagctttacagcatctt
atgcccgatcattgggaagatatttgccaacacacacatactaatttaacaaaacgcctt
attgcctatgaggacgccgctccatttttatatttacaggacaaaattgaagggcaacag
acaaatacgatgatccgtcatgttttaattgatgaagcacaggactattcaccattccaa
ctcacagtattacagcaactatttccaaaagctcgaatgaccatcttaggggatggacac
caaacgattcaccctcatacctttgagaatccttcactacttgaccctgaattatatggt
gggcaggccgaaaaaatgattttaaccaaaagctatcgttcgacaaagcaaatcatttca
ctcacttccaatattttaaatgatggtagtgaagtagaggcttttaaccgcaatggtcct
gaaccttcaattaccattgtgccaaatgaattagagttagttgatcgaattatccagaac
atcaataatctttctaccaaatttgaaacaattgcagtcatttgtaaaactacagctgaa
tgctctgctgtatacgaacaattaagaaaccaaatagatattcaactcattactcacagc
actaagcaatttaaaaagggtattttattacttccagcgtatatggcgaaaggaattgag
tttgacgctgtcattatctataatgcgtctgccgctaattattcaagagaaagtgaacgg
tactatttctatacagcctgtacgagagctatgcatgagttgttcatctattccattaat
aaagtaacttctttccttcaataa
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