Listeria ivanovii subsp. ivanovii PAM 55: LIV_0203
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Entry
LIV_0203 CDS
T01623
Name
(GenBank) Putative DNA repair protein Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_0203
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LIV_0203
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_5
RecA
Rad51
AAA_24
AAA_14
AAA_16
AAA_22
nSTAND3
AAA
SLFN-g3_helicase
ATPase_2
NTPase_1
ABC_tran
divDNAB
DUF2642
ABC_ATPase
DZR
AAA_30
NPHP3_N
DUF7125
DAP3
KTI12
AAA_10
zf-RING_10
NACHT
Motif
Other DBs
NCBI-ProteinID:
CBW84682
UniProt:
G2ZA10
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Position
237289..238662
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AA seq
457 aa
AA seq
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MAKAKRTTKFVCQACGYESPKWMGKCPNCNEWNQMVEALEPSKKSRSAFNHTGEAAKATP
ITQIASEEEARVETRMPELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTLTNKK
VLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPDFVVIDSIQTVYH
PDVTSAAGSVSQVRECTAALMRIAKMQNIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFE
GERHHAYRILRAVKNRFGSTNEIGIFEMRDVGLVEVANPSEVFLEERLEGASGSTVVASM
EGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAG
GVKLDEPAVDLAVAVSVASSYRDKPTKSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGF
KRIFIPKNNEGTWKIPKDVQVVGVETIGEALKKALPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaaaaggacgaccaaatttgtatgtcaggcatgtggatatgaatcgcca
aaatggatggggaaatgtccgaattgcaacgagtggaatcaaatggtggaggcgctagaa
ccatctaagaaatcacgctcagcttttaatcatactggggaagcggcaaaagcaactccg
attacgcagattgccagcgaagaagaggctcgagtagagacacgtatgcctgagttaaat
cgtgtacttggtggtggagttgtcccaggatctatggtactagttggtggggatccaggt
attggtaaatcaacacttttacttcaagtatcagcacaactaacgctgacaaataaaaaa
gtactgtatatttctggggaggaatcaatcaaacaaacaaaacttcgagctgagcgattg
caagtttcaggagataatttatatgtttacgcggaaacgaatttagaagcagtgcaagaa
acgattgattttgtgaaaccagattttgttgtaattgactctattcaaacagtgtatcat
ccagatgtcaccagtgctgctggaagcgtatctcaagttcgtgaatgtacggcggcttta
atgcgaatcgctaaaatgcaaaatatcgctatttttatagtagggcatgtaacaaaagaa
ggcgcaattgcaggaccacgtttacttgaacacatggtagatacggtgctctattttgag
ggagagcgccaccatgcttaccgaattttgcgtgctgtgaagaaccgttttggatcaacg
aatgaaattggtatttttgaaatgcgtgatgtaggtcttgttgaagttgccaatccatcg
gaagtcttcctagaagaacgtttagaaggagcatcaggttcaacggtagttgcatctatg
gaaggaacacgcccagtacttgtcgaaattcaagcccttgtttcaccaaccatgtttgga
aatgcaaaacgaatggcaacgggaattgattataataaagtatcattgataatggctgtt
ttggaaaagagagtaggattaatgctacaaaatcaagacgcttatctgaaagcagcaggt
ggagtgaaattggacgaaccggctgtagatttagctgtggctgtaagtgtagcatcaagt
taccgagataaaccgactaaaagtactgattgctttatcggcgaactaggtttaactgga
gaaattcgtcgagtggcaagaattgaacaacgcgtacaagaggcggcaaaacttggattc
aaacgaattttcattccgaaaaataatgaaggtacttggaaaataccaaaagatgtgcaa
gtggttggagtagaaacaattggggaagctttgaagaaggcattgccagactga
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