Listeria ivanovii subsp. ivanovii PAM 55: LIV_1164
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Entry
LIV_1164 CDS
T01623
Name
(GenBank) Putative uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LIV_1164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_1164
Enzymes [BR:
liv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LIV_1164
DNA repair and recombination proteins [BR:
liv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LIV_1164
Prokaryotic type
LIV_1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBW85652
UniProt:
G2ZF49
LinkDB
All DBs
Position
1212850..1213524
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AA seq
224 aa
AA seq
DB search
MIKLENDWDELLKDEFIQPYYLKLRQFLKKEYQTKTVFPDMYDIFNSLKHTSYQNVKVVI
LGQDPYHGKGQAHGFSFSVQKGVEIPPSLQNIYLELKNDLHCDIPNNGYLIPWADQGVLL
LNTVLTVRAGQANSHRGQGWEILTNRIIELINQKEEPVVFLLWGNNAKEKMQLLTNPHHQ
VLTSVHPSPLSASRGFMGCKHFSKANEFLTNKGVKPIDWQIPSI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacttgaaaatgactgggatgagttgctaaaagatgagtttatacagccttat
tatttaaaactacgtcaatttctcaaaaaggaataccaaacaaaaaccgtttttcctgat
atgtatgatatttttaattcgttaaaacatacgtcctatcaaaatgtaaaagtggtaata
ctcggtcaagatccataccatggaaaaggacaagcacatggtttttctttttctgttcaa
aaaggagtagaaataccaccatcactacaaaatatttatttagagcttaaaaatgacctc
cattgtgatattccgaacaatggttatcttataccatgggctgaccaaggagtgttgcta
ttaaataccgtattaaccgttcgcgcgggtcaagcaaattcccatcgcggacaaggctgg
gaaatattgacgaaccgaattattgaactaatcaaccaaaaagaagagccagttgtcttt
ttactttggggaaacaatgcgaaggagaagatgcaactattaactaatccacatcatcaa
gtacttacatccgtccacccaagtccactttctgcttcacgtggatttatgggatgcaaa
catttctcgaaagcaaacgaatttctgacaaacaaaggggttaaaccaattgattggcaa
attccttctatataa
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