Listeria ivanovii subsp. ivanovii PAM 55: LIV_1279
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Entry
LIV_1279 CDS
T01623
Symbol
truB
Name
(GenBank) Putative tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liv03016
]
LIV_1279 (truB)
Enzymes [BR:
liv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LIV_1279 (truB)
Transfer RNA biogenesis [BR:
liv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LIV_1279 (truB)
Prokaryotic type
LIV_1279 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Vault_4
DUF6210
DUF483
Motif
Other DBs
NCBI-ProteinID:
CBW85758
UniProt:
G2ZFN6
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Position
1336498..1337412
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKEIEEISAEELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDMALTETNPTFRLEISCGKGTYIRTL
SVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQANNSEFLYPLEKGIESMEK
LVIDEEIHAKVLNGGLLPVSLFSSLQDEPRAALIFEDKLTAIYKPHPEKKDLWKPEKVIE
LQQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatcccactgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaaaattttacatacaaaaaaagtcggacatacaggtacgctcgatccagaa
gtagaaggcgtactcccgatttgtatcggacgtgccacaaaacttgctgaatatgtaact
gatgagggcaaagtatatgtagcagaaataacacttggcaaatcaactacaacagaagat
gcgactggcgagactgtcatgacaaaagagattgaagaaatttcagcagaagaacttcaa
gctgcacttactaaactgacggggaaaatcacccaaattccaccaatgttttcagctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggaatagaggtagaaaggcca
tccagacaagtggatatttattcattaatccgcttagatggtgatatggcgctaactgaa
acgaacccgactttccgcttagagatttcatgtggaaaaggaacttatattagaacgctc
tcggtaatgattggcgaattgttaggttatccagcccatatgtccaaactagaacgtacc
cgtagtggttttttcaaaaaagaagattgcctaactctagcggaaattgatgaaatgatg
caagcgaataatagcgagtttttatacccacttgaaaaagggattgaatcaatggagaaa
ttagttattgatgaagaaatacatgcgaaagttctaaatgggggcttattaccagtttct
ttatttagtagcctgcaagatgaacctcgtgcagcgcttatttttgaagataaattaacc
gcaatttataaaccgcatccagagaaaaaagacctttggaaaccagaaaaagtcattgag
ttacagcaagcatag
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