Listeria ivanovii subsp. ivanovii PAM 55: LIV_1350
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Entry
LIV_1350 CDS
T01623
Name
(GenBank) Putative unknown protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LIV_1350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liv03019
]
LIV_1350
Messenger RNA biogenesis [BR:
liv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LIV_1350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HTH_6
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
CBW85828
UniProt:
G2Z8D8
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All DBs
Position
1406728..1408290
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AA seq
520 aa
AA seq
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MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIVEDAKKEAETTKKEALL
EAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLERKEESIS
KRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEDELTHDTAIMVKESEN
RAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEHIR
EVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGELGEDVTL
AKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVEPDAID
DLASYRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcaatcacgatcatctccagtttgcttttcttaatcgtcggtctagttgtt
ggttctctaatttttaaatctagtacagagaaaaaactggctgctgcaagggggactgct
gaattaattgtagaagatgcaaagaaagaagcagaaactacaaaaaaagaagcattgctt
gaagcgaaggaagagaatcataggttacgtactgaaatcgaaaatgaacttcgtgggcga
agaacagagacacagaaagcagaaaatcgcttattgcaaagggaggaaaacctcgaccgt
aaagatacttctttaagtaaacgagaagctacacttgaaagaaaagaggagagtatcagt
aaacgtcaacaacaaattgaagagaaagaaagcaaactagctgagatgattcaagcggag
cagacagaacttgaaagaatttctgcactgagcaaagaagaagcgaaatcaatcatcctt
aaccaggtagaagatgaattaacacatgatacagcaatcatggtgaaagaatcggaaaac
agggcgaaggaagagtcggataaaaaagcaaagaatattctctcactagctatccagcgt
tgtgcagctgatcatgtggcagaaacaacggtatctgttgttaccttaccaaatgatgag
atgaaaggacggattatcggacgtgaaggccgtaatatccgcacgctagaaacgctaaca
ggaatcgatttgataattgatgatacaccagaagcagtaatactttctggatttgatcca
attcgacgagaaatcgctagaatcgccttagaaaaacttgttcaagatggaagaatccat
ccagctcgcattgaagaaatggtggacaaagcccgtaaagaggtggacgaacacattcgc
gaagttggtgaacaagcaacatttgaagtgggaattcattccattcatcctgatttaata
aaaattcttggccgcttgcgttaccgtactagttacggacaaaacgttcttaaccactca
ctcgaagtttcgaaacttgctggaattttagcaggggagctcggggaagatgtaacgctt
gctaaacgggccggactacttcatgacattggtaaagcaatcgaccatgaaattgaagga
agtcatgtagaaattggtgtggaacttgcaactaaatacaaagaaaatgatgtagtaatc
aatagtattgcttctcatcatggagatacagaggctacttctgttatcgctgtattggtt
gctgcagcagatgcactttctgccgcaagaccaggagctcgtagtgaaacgctagaaaac
tatattcgccgtttagagaaattagaagaaatttctgagtcttacgatggtgtagaaaaa
tcttatgctattcaagcaggacgtgaagtacgtatcattgttgagccagatgctattgat
gatcttgcttcttaccgacttgctcgcgacataagaaaacgaattgaagaggaattagat
tatcctggtcatattaaagtgaccgtcattcgtgaaacaagagcagtagaatatgctaaa
taa
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