Listeria ivanovii subsp. ivanovii PAM 55: LIV_1439
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Entry
LIV_1439 CDS
T01623
Symbol
comEB
Name
(GenBank) Putative ComEB protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv00240
Pyrimidine metabolism
liv01100
Metabolic pathways
liv01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LIV_1439 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
liv02044
]
LIV_1439 (comEB)
Enzymes [BR:
liv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LIV_1439 (comEB)
Secretion system [BR:
liv02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LIV_1439 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
CBW85922
UniProt:
G2Z932
LinkDB
All DBs
Position
complement(1505215..1505775)
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AA seq
186 aa
AA seq
DB search
MQRIAWDQFFMAQSHLISSRSTCTRLMVGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYV
VDGHCIRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKDYK
NHPYALELFNIAGVELQKVEFDESVLQINNWNAEKMRTLVKEAAVEVNITPEKAEQLYQN
ISEKLT
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaagaatcgcatgggatcagttttttatggcgcaaagtcatttaatatcatcacga
agcacgtgtacaagattaatggtaggtgcgacaattgttcgagataaacggattattgca
ggtggatacaatggttccatagctggtggagatcattgtgctgaacatggttgttacgtt
gtcgatggacattgtatccgcacaattcatgccgaaatgaatgcaattttacaatgtgct
aagtttggtgcaacaacagataaagctgaattatatgtaacacattttccttgcctagca
tgtactaaatcaattattcaggctggaataaagaaagtctattttgctaaagattataag
aatcatccatatgcattagaactatttaacatcgctggtgtagaattacaaaaagtggaa
tttgatgaatctgttcttcaaataaataattggaatgcagaaaaaatgcgcactttagta
aaagaagcagcagttgaagtaaatattaccccagaaaaagcagaacaactttatcaaaat
atttcagaaaagttgacttaa
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