Listeria ivanovii subsp. ivanovii PAM 55: LIV_1610
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Entry
LIV_1610 CDS
T01623
Name
(GenBank) Putative SNF2-type helicase
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
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Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
NAGLU
TetR_C_44
Motif
Other DBs
NCBI-ProteinID:
CBW86095
UniProt:
G2ZAC1
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Position
complement(1689479..1692697)
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AA seq
1072 aa
AA seq
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MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFFEKDATGHFLTYFIDQNVVEDAGNENYA
CSCADFQLNAICKHIYATHLKMEKQKQKAAKQDFKNRILTQESNTLLSLFQQNMAQQLDV
EEDNTNKIPLLTQYIIRLKPDDSSYIMTIEVKVGTERTYVVKNMNIFLAAVRDRQWLVFT
KNFAYDPNEHYFTEVDKKILEKLLQISEIAKMYDTDTFYWNKSYAEEKNLTIPPSMASDL
LELLSERDTMCIIMKDRVEDIKYRGLAVRHEQLDFIFELRKSSDDKYQLEMEDLQQAIFL
EAYQLLFFDGTFFIPTHEVWESLKPLMEFHKVTKNEVVQFSESQLSEVVSYVLPALQKSG
KLKLDDSIEGRITQQPLDCKLFIALEYGEHTLRLEYHYGNQQFDPFVTTEEENEKIMIRD
VEKEARVMNILESAPVHFSGTKMVVNKQEKELYQFYYRTIPKLAEFAEIYMEDGLEEMVE
DNVRPVTTLDVTGDNDYLSVTFDFKGIPEEEVQNVLESLREKRSYHRLKNGRFLSLESEN
YKQMEDVLQMLEVRKKDVQSNMQVPLYRGMQIYDILGAGTQDEHHKFSRSFRELLTDITT
QSEDSFDLPSGLKTELRDYQLTGFEWMKSLAKYNLGGILADDMGLGKTVQTISFLASELE
DNPNLKPVLIVTPASLLYNWQSELEKFAPMIPVSVLHGTKESRMVEMKEMKRGHVYLISY
PSLRQDILNLSDVAFSSVIIDESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDEL
WAIFQTLMPGFFPSLRKFKEIPYENIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTD
EQKTIYLAYLEKIQADLEESSGNASEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLL
QLFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFN
GGENDIFLISLKAGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMI
TKGTIEERIFDLQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDEK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagcactttaccgcaattcaaaataaaatgattccatatagtgttaagcaggccgga
aaaaaactgatggaagacggagaaattattcagtttttcgaaaaggatgcaacaggtcat
ttcctaacatattttattgatcaaaatgtagtggaagatgctggaaatgaaaattatgca
tgtagttgtgcagattttcagctgaatgcgatttgcaagcatatttatgcgacacattta
aaaatggaaaaacaaaaacaaaaagcagctaaacaagattttaaaaatcgaattcttacg
caagaatccaatacacttctatccctttttcaacaaaatatggcgcaacaactcgatgta
gaagaagataacacgaataaaataccgcttctgacgcaatatattattcgtctgaagcca
gatgattctagctatatcatgacgatcgaagtgaaggttgggacagaacgaacgtatgtc
gtgaaaaatatgaatatatttcttgctgcagttcgtgaccggcagtggctcgtatttacg
aaaaattttgcttatgacccaaacgaacattattttacagaagtggataaaaaaattcta
gaaaagcttcttcaaatcagtgaaattgcgaaaatgtatgatacggatactttttattgg
aataaatcttatgcagaagaaaagaacttaacgattccgccaagtatggcaagtgactta
ttagaactcttgtctgaacgtgatacgatgtgtattattatgaaagatcgagtggaagat
attaaatatcggggtctagctgttcgtcatgagcaattagatttcatcttcgaacttaga
aaaagttctgatgataagtaccaattggaaatggaagatttacagcaagcaatctttttg
gaagcatatcaactcctattttttgatggtactttttttattccaacacatgaagtatgg
gaatctttaaaaccactgatggagtttcataaagtaacgaaaaatgaagtcgtgcaattt
tctgagtcgcaattaagtgaagtcgtttcttatgttttaccagctttacaaaagagcgga
aaactaaaattagacgattcgattgaaggacgtattacgcaacaaccacttgactgcaaa
ctctttatcgcgttagagtacggcgaacatactttgcgactagagtatcattacggcaat
caacaattcgacccatttgttacaacagaggaagaaaatgaaaaaatcatgattcgagat
gttgaaaaagaagcacgagtgatgaatattttagaaagcgcacctgttcatttttctgga
acaaaaatggtagtgaacaagcaagaaaaggagctctaccagttttattaccggacgatt
cctaagcttgcagagtttgcggaaatatatatggaagatggactggaagaaatggtggaa
gataatgttcgtcctgtaacaacattagatgttactggcgacaatgattatctttccgtg
acctttgattttaaaggtatacctgaagaagaagtccaaaatgtcctagaatctttacgc
gaaaaacgaagctatcatcgtttgaaaaatggtcgtttcttatcactagaatcagaaaac
tataaacaaatggaagacgttcttcagatgctcgaagttcgtaaaaaagatgtccaaagt
aatatgcaagttccactttatcgagggatgcaaatttatgacattctaggagcaggaaca
caagatgaacatcataaattcagccgatcatttcgcgaattattaacggatataactaca
caatctgaggatagttttgatttaccaagcggattaaaaacggaattacgtgattatcaa
ctgacaggatttgaatggatgaaatcacttgctaaatacaatcttggcgggattttagcc
gatgatatgggactggggaaaacagttcaaaccattagtttcctagcatcggaattagaa
gataatccgaacttaaaaccagtattaatcgttacaccagcttctctactatacaactgg
caaagcgaacttgaaaaatttgcgccaatgatccctgtttccgttttacatggaacaaaa
gagtcgcgcatggttgaaatgaaggaaatgaagcgtggccatgtctatttaatttcgtat
ccatcgcttcgtcaagatattttgaatctctcggatgttgctttttcaagtgttattatt
gatgaatcacaagccatcaaaaactatcacacgaaagcgtcgcaagccgttcgagctttg
aaacggaatcatgtttttgcattaagtgggacaccgcttgaaaatagcattgatgaactt
tgggcaatttttcaaacattaatgcctgggtttttcccatcgctacgaaaatttaaagaa
attccgtatgaaaatattgcaaaaatgattcgaccatttttactgcgacgtcttaaacaa
gatgtagtaaaagagttacctgataaaattgagacgaatctttattctgaattgaccgat
gaacaaaaaacgatttacttggcttatttagaaaaaattcaagctgatttggaagaaagt
agtggcaatgcttctgaagaacggattaaattgctagcaggattaacccgtttacgccaa
atttgctgtgatccaagtctttttgtcgaaaattatcaaggtgaatctggtaaactacta
cagttatttgatacaatacagacagcaagagaaaacggtaaacgaatcttgattttttct
cagttcacaggaatgctcgcgattattcgccgcaaactagaagaagatggtcaaacattc
ttctatatggacgggaaaacaccagcgaaaacgaggttggatatggttaactcctttaat
ggaggggagaatgatattttcttgatttctttaaaagctggaggaacaggattgaatcta
gttggtgctgacacagtgattttatatgatttatggtggaatccagctgtagaagaacaa
gcaactggacgggctcaccgaattgggcaaaaacgtgttgtccaagttttccggatgatt
acaaaaggtaccattgaagaacgaatttttgatttacaaaagaaaaaacaagccctggtg
gatgaacttatccaaccaggtgaacaaatgctaggaaaacttagcacagaagaaattaaa
caaattttacaattggataatggaagggatgaaaaataa
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