Listeria ivanovii subsp. ivanovii PAM 55: LIV_1736
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Entry
LIV_1736 CDS
T01623
Symbol
pcrA
Name
(GenBank) Putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv03420
Nucleotide excision repair
liv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LIV_1736 (pcrA)
03430 Mismatch repair
LIV_1736 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_1736 (pcrA)
Enzymes [BR:
liv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIV_1736 (pcrA)
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIV_1736 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LIV_1736 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
DUF6990
AAA_22
AIG1
Motif
Other DBs
NCBI-ProteinID:
CBW86223
UniProt:
G2ZBE3
LinkDB
All DBs
Position
complement(1839570..1841765)
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AA seq
731 aa
AA seq
DB search
MNAKELVDGLNPEQKRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNILAI
TFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSDQL
SVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYVKEASGFYDKMVGEVYEKYEK
KLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKLLASR
FKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVIEN
NGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSSRPLSDFAILYRTNA
QSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIINVPKRGV
GPGTLEKLNNVATAYDLSLFEVLNRIELAGISAKISKDLVAFHDLVRGFTQMQDFLSVTE
LVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENEDKTLIAFLTDLALVA
DVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRL
AYVGITRAEEELFLTSAYSRMLYGRPYSNQESRFIGEIPRDLLELANENKLKSEKPYAKP
RMPQKATTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKR
LLAEFAPIEKV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgcaaaagagttagtagacggattaaacccagaacaaaaacgggcagtagaaagt
acagaaggacctttattaattatggccggcgccggtagtgggaaaacacgagttttaaca
catcggatagcctatttagtgagggaacgtggcgtgaatccgtataatattttagcgatt
acgtttacgaataaagccgctcgtgaaatgaaatcacggattggcaatttgatgggcggg
gaagcagaatctatttggatttccacttttcactcgatgtgtgtccgtattttacgccgc
gatatcgaccgaattggttacgaacggaatttcactattttagatggcagtgaccaacta
tccgtcatcaaaggcattttgaaggaaaaaaatgttgacccgaaaaaatttgaaccaaga
ggcattcttgcttctatcagtaacgccaaaaacgaactgattaccgcaagtgaatatgtg
aaagaagctagcggtttttacgacaaaatggtcggcgaagtgtatgaaaaatacgaaaag
aaattaaagaaaaaccaagcactcgattttgatgatttaatcatggtgaccattcagtta
tttgaacgagttccggatgttttggaatattatcaacgcaaattccaatatattcacgtg
gatgagtaccaagatacgaaccatgcccaatatctactcgtgaaattacttgcttctaga
tttaagaatttgtgtgttgttggtgattcggatcaatctatctatggttggcgcggggcg
gatattagcaacatcatgtcttttgaaaaagattatcctaatgcgaaaaccattttatta
gaagaaaattatcgttcaaccaagcggattttagaagcagcaaatcgagtaattgaaaat
aatggtaatcgtaaaccaaaaaatctttggactagtaatgcagaagggaaaaagattttt
taccataaagcattaactgaaaaagaagaagcggcttatgttgtgatgaaaatccaagag
gaagtaaacaactcaagtcgtccgttatctgactttgcgattctttaccgaaccaatgca
caatcccgtgtcatggaagaatatttcatgaagtcgaatatggcttatacgatggttggc
ggaacaaaattctatgacagaaaagaaattaaagatattttagcttatttgcgacttatt
agtaataatgaagatgatattagtctgacacgaattattaatgtaccgaagcggggcgtt
ggtccaggtacgcttgaaaagctcaataatgttgcaacagcgtatgatttaagtttgttt
gaagtacttaatcgcattgaactagctgggatttctgccaaaataagtaaagatcttgtg
gcgtttcatgacttagtccgtggctttacccaaatgcaagatttcttatcagtaacagaa
cttgtagaagaaattcttgaaaaaacaggttaccgcgcgatgcttaaaaacgaacgaaca
atcgaagcccaaacaaggctagaaaatattgacgagtttttatctgtaacgcaaaacttt
gaaaaagaaaatgaagataaaacgttaattgcattcttaacagatttagcgcttgttgca
gatgttgataagttagaagaagataatgaagagcaaaatggtgcggtaactctcatgacg
ctccactctgccaaagggttagaattcccggttgtctttttagttgggatggaagaaggg
attttccctcattcaagagccatctatgaagaagacgaaatggaagaagaacgtcgctta
gcttatgtgggtatcacgcgcgccgaagaagagcttttcttaacaagcgcttattcacga
atgctctacggtcgcccctactctaaccaagaatctcgctttattggcgaaattccgcga
gacttactcgaactagcaaatgaaaataaattaaaatcagaaaaaccttatgccaaacca
cgcatgccacaaaaagcaacgacggcatataaatcaagtggggctgagacactcggctgg
acagttggcgacaaagctagccacaaaaaatggggcgttggaacggttgttagcgtcaaa
ggcgaaggtagcggaatggagctagacattgccttcccaagtccaacaggtgttaaacga
ttgctcgcagaatttgcgccaattgaaaaagtataa
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