Listeria ivanovii subsp. ivanovii PAM 55: LIV_2207
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Entry
LIV_2207 CDS
T01623
Name
(GenBank) Putative 3'-to-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liv03019
]
LIV_2207
Messenger RNA biogenesis [BR:
liv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LIV_2207
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CBW86701
UniProt:
G2ZEC3
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All DBs
Position
complement(2337226..2338167)
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AA seq
313 aa
AA seq
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MEKRLLDYEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSGELEAKLWDVKESDEVS
YGVQQIVQLTGDIQNYRGRKQLKIRQIRQATALDGVSASEFMETAPINKEDIADEITQYI
FEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGLSFHVVSMLRLAKSVADLYPS
VNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGHISIVVEEVSKIAEELSIDGEEV
VVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLMDASLNMMDKVLKHTKPGEFSERVF
GLDNRSFYNPTFE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagattattagactatgaagttggagaaacagttgatttatttttgttaata
aaatcaagtgtcaaaggaactgcaagtaatgggaagccatttttgagcctcgttttacaa
gataaatcaggtgagttagaggcgaaattatgggatgtcaaagagagcgatgaagtaagt
tacggagtacaacaaatcgttcagcttacaggcgatattcaaaattatcgtggtagaaaa
caactgaaaatccgtcaaataagacaagctactgcgctagatggtgtcagtgcaagcgag
tttatggaaacagccccaataaataaagaagatatagcggatgaaattacgcaatatatt
tttgaaatgaagaatgccaacttacaaagaattacaagagcacttcttaagaaatatcag
gatgacttttatgactatcctgctgcgatgcgtcatcatcatgagtttgtttctggcctt
agtttccatgtagtttcgatgttacgattagcaaaatccgttgctgatttgtatccatct
gttaatagagacttactttatgcaggggttattttacacgatttaggtaaagtgattgag
ctttcaggaccagtttcaacaacctatacacttgaagggaacttgataggtcatatttca
attgtcgtggaagaagtaagcaaaattgctgaggaactttcgattgatggtgaagaagtt
gttgttttaaaacatgttttactttcgcatcacggaaaaggtgaatggggaagtccaaaa
ccgccactagttcgtgaagcagaaatcttacatcaaattgacttaatggatgcttctcta
aatatgatggataaagtattaaaacatacaaaaccaggtgaatttagtgaacgagtattt
ggcttagataatcgttcgttttataatcctacttttgaataa
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