Listeria ivanovii subsp. ivanovii PAM 55: LIV_2253
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Entry
LIV_2253 CDS
T01623
Symbol
addB
Name
(GenBank) Putative ATP-dependent deoxyribonuclease (subunit B)
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_2253 (addB)
Enzymes [BR:
liv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIV_2253 (addB)
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LIV_2253 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
CBW86748
UniProt:
G2ZEG1
LinkDB
All DBs
Position
complement(2385386..2388859)
Genome browser
AA seq
1157 aa
AA seq
DB search
MTLQIIAGRSGTGKTTHLMNEVGAKIKQNSKTYIFIVPDQMTFQMETHFLKKGKLAGMMG
TQIFSFSRLAWKILQETGGLSKTFLSKTGIEMVIRKAALDKKEELKVFSRATSRKGFYTE
LANLFKEMKQEEISINDLEESARTLPTSVTNKVHDISLIYQKYEELLTGKFLENEDYLRL
LAEKITESDYLNDTEIIIDGFNSFSKQELTVIERLMQKCDKVTVSLTLNVPNIREGLEEY
SMFKASTETYLALLEIAKLNNIDVGEDKLLTENKRAKTVSLEFLTNTWGQNKFAAFEGEA
TNLSIHQANNRRAEIEGIAREIRKLTLNGYSYKDIAILTRNLGDYDVLVETVMEAYDIPI
FIDKKRAMAKHPFIEFIRSSLDAIQFNWKYEPIFQAVKTEFFFDITEEAADMRRKSDILE
NYVLENGIQNKWKWEKEGDWIYRKIRGLSTNVLPQTDEELSTQNIINEMRNRIVIPLSTL
EMNLTRASTGQEFALALYHYIEQVQAVEHLESWRRVAEDNGYLELAREHEQAWNSISALL
DEFVEVLGEESLDLTSFIEIVMTGLDALEFSLLPPALDQVVLSDMENAKLLNMKVIFAIG
MNDGVMPLRQKDKGILSDQDRDFLREQNSNLKASAKNNIGEEDLLAYKIVSLPSDKLFLS
YPAADEEGKVLTESNYLRKIKGQFKNLSEAVYLTDPSLLNDEEQSSYIRSKQAVLGLLTS
QLQMYKRGYPVSNVWWDAYNSYFDDKKESKTAKQVLSSLYYENKTAPLQEATAKGLFGEN
IHASVSRMEKFFSCEFQHFAQYGLKLEERAHFQLQAVDMGEIFHAAMEWISAELKRNNMD
WGSLNVEECKHLAKIAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSS
AFRPVGLEVDFGLKGDIPPLKIPLQSNSELLLQGRIDRIDVAEQDNRTFLRIIDYKSSSH
DLALTEVYYGLALQMLTYLDIVVMNAQKMLGKDAEPAGVLYFHMHNQFVQSDKELTEDQL
AKEVQKSSKMKGLILSDPVAVSLMDTTLEKGKSSTIIPAEIKQNGELSARSRTATRNEFD
KMRQFVRNKYQEAGNKILDGAVSINPYKLKERTPCQLCGFRSFCSFDPSLTSNQYRHLTN
EKTETILTKMDIEGGTQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcaaataattgctggaaggtcaggaacaggcaaaacaacacatctaatgaat
gaagtaggggcaaaaattaaacaaaattcaaaaacgtatatctttattgttccagatcaa
atgacttttcaaatggaaactcattttttgaaaaagggaaaacttgcagggatgatggga
acacaaatttttagttttagtaggcttgcctggaagatacttcaggaaacgggcggatta
tctaaaacattcctaagtaaaacaggcattgaaatggttatccgaaaggcagctttagac
aaaaaagaagaattgaaagttttttccagagctacttctagaaaaggcttttatacagag
cttgccaatttatttaaagaaatgaaacaagaagagatttcaattaatgatttagaggaa
agcgccagaacgttaccgacaagcgtaactaataaagtgcatgatatttcattgatttat
caaaaatatgaagagttgttgacgggtaaatttcttgaaaatgaggattatttaaggctt
ttagctgaaaaaattactgagagtgattatctaaatgacacagaaataattattgatgga
tttaattctttttctaagcaagaattaactgtgatagaaagattaatgcaaaaatgcgat
aaagtgactgtttcacttacattgaatgtccctaacattcgagaaggattagaagaatat
agcatgtttaaagcgagcacagaaacatatcttgctttattagaaatagctaaattaaat
aatattgatgtaggagaagataagttactaactgaaaataaacgagcgaaaacagtatcg
ttagagtttttaactaatacttggggacaaaataaattcgcagcttttgaaggggaagca
acgaatttaagcattcatcaagctaataatagacgtgctgaaatagaagggattgcccgc
gaaattcgaaagcttactttaaatggttatagctataaagatattgctattttaacaaga
aatctaggggactatgatgtcttagttgaaacagtaatggaagcctatgatattcctata
tttatagataagaagcgagcgatggctaaacatccatttattgagtttatccgctcaagc
ttagatgcaattcaatttaattggaaatatgaaccaatttttcaagctgttaaaacagag
ttcttttttgatattacggaagaggcagcagatatgcgccgtaaatcagatattctggaa
aactatgtacttgaaaatggaattcaaaataaatggaagtgggagaaagaaggtgactgg
atttatcggaaaatccgaggcctctctaccaatgttttacctcaaacagatgaagagtta
agtacacaaaacattattaatgaaatgcggaatcgtattgtaataccactttcaacatta
gaaatgaatttaactagagcaagtacaggacaagaatttgcgctagccttataccattat
attgagcaagtccaagcagtggagcatttagaatcttggagaagggtagcggaagacaat
ggctatctggaactagcacgtgaacatgagcaagcttggaattctatttcagcacttttg
gatgaatttgttgaagttttgggagaagaatcgctagacttaactagctttatagaaata
gttatgactggcctggatgcactagagttttctctattaccaccagcattagatcaagtc
gttttatccgatatggaaaatgccaagttattaaatatgaaagttatttttgcgattgga
atgaatgatggcgtgatgccactgcgtcaaaaagacaaaggaatcttatcagatcaagac
cgggactttttacgggaacaaaatagtaatttaaaagcatccgctaaaaataatattggg
gaagaagatctattagcttataaaatagttagtttgccaagtgataagctgtttcttagc
tatccagctgcagatgaggaaggaaaagtattaaccgaatcaaactaccttcgcaaaata
aaaggacaatttaaaaacttgagtgaagcagtttatttaacagacccaagtttattaaat
gatgaagaacaaagtagctatattcgctcgaaacaggctgtattagggttactcacgagc
caattacagatgtataaacgtggttatcctgtatcaaatgtgtggtgggatgcatataat
agttactttgatgataagaaagaatctaaaacggcgaaacaagtattatctagcctatat
tatgaaaataaaacagcgcctttacaagaagcaacagcgaaaggcttatttggtgaaaat
atccatgcaagtgtttctagaatggagaagtttttcagttgtgaattccagcactttgct
caatatggtttgaaattagaagaaagagcacatttccaactccaagcagtagatatggga
gaaatctttcatgcggcgatggaatggatttcagcagagttgaaacgcaataatatggac
tggggaagcttaaatgtagaagaatgtaagcacttagcaaagattgcaatgacatttcta
gcacctaaaatccaacatgaaattttactaagctctaagcgaatggaatatattcaatat
aaattactccaaataattacaagagcgacaacggttttaaatgaacaagcaaaaagtagt
gcctttagaccagtaggattagaagtggattttgggttaaaaggtgatattccaccattg
aaaataccattacaatcaaatagtgagttacttttacaaggaagaattgatagaattgat
gttgcagagcaggataatcgcactttcctacgtattattgattacaaatctagctcacat
gatttggcgcttacagaggtttattatggactagcgcttcagatgttaacatatttagat
attgttgtaatgaacgcgcagaaaatgcttgggaaagacgcggaaccagcaggagtactt
tatttccatatgcataaccagtttgttcaatctgataaagaattaacggaggatcagctt
gctaaagaagtacagaaaagttctaaaatgaaaggattgattctttctgacccagttgct
gtttccttaatggatacaacacttgaaaaaggaaaatcatcgactatcatcccagctgaa
atcaagcaaaatggagaactcagtgctagatcaagaacggcgacaagaaacgagtttgac
aaaatgcgtcaatttgtacgtaataaatatcaagaagctggaaataaaattctcgatggt
gcagtttcgataaatccgtacaaattaaaagaaagaactccatgtcaactttgtggattt
cgttcattttgtagttttgatccatcattgacgagtaatcaatatagacatttaacaaat
gaaaaaacagaaacgatattaacaaaaatggatatagaaggaggaacgcagtag
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