Listeria ivanovii subsp. ivanovii PAM 55: LIV_2658
Help
Entry
LIV_2658 CDS
T01623
Symbol
dnaX
Name
(GenBank) Putative DNA polymerase III (gamma and tau subunits)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv03030
DNA replication
liv03430
Mismatch repair
liv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIV_2658 (dnaX)
03430 Mismatch repair
LIV_2658 (dnaX)
03440 Homologous recombination
LIV_2658 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liv03032
]
LIV_2658 (dnaX)
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_2658 (dnaX)
Enzymes [BR:
liv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIV_2658 (dnaX)
DNA replication proteins [BR:
liv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LIV_2658 (dnaX)
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LIV_2658 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
AAA_19
PIF1
AAA_assoc_2
AAA_7
AAA_16
Mg_chelatase
AAA_2
Rad17
AAA_24
AAA_14
B12-binding_2
nSTAND3
DUF815
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CBW87160
UniProt:
G2Z969
LinkDB
All DBs
Position
complement(2796244..2797977)
Genome browser
AA seq
577 aa
AA seq
DB search
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAK
AINCEHGHDGEPCNECDICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITT
QDIIGRLEFILKEEKTPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVDDALEI
TGSIAQGLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPN
LEETLERALIDDEFVSLAKRANSFKIYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQA
GQTVGESAAPVEVASGDVSALKQQMEQLQLELQTLKKQIASGAGVAPTEKPAQNRGGSKK
QINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASLD
TFVLKFKHEIHCQMAMDNPNFVETITSSIAKLTQVNYTFIGIPEDQWAEVRENFLHSHVG
NGDSEEGANPEARKPAEDPFVLEATKLVGEDLLEIKD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaggctttgtatcgggtttttcggccgcagtcgtttcaggatgttgtggga
caggaacatgtgacgaaaacgcttaagaatgccattgtgcaaaataaaacttcgcatgct
tatttattctcgggacctcgggggactgggaagacgagtgcggcgaagatttttgcgaag
gcgattaactgtgaacacggtcatgacggagagccttgtaatgaatgtgatatttgtaag
ggcacaacggatggctctataccagatgttcttgaaattgatgctgccagtaataacggg
gttgaagagattcgagatatccgggaaaaagtaaaatatgcgccaactgtggcgaaatat
aaagtatatattatcgatgaagtgcatatgttatcgacgggagcgtttaatgcgctatta
aaaacactagaagaaccgccaaaacatgtcatttttattttggcaacaacagaacctcat
aaattaccactaacaattatttcccgtgtacagcgatttgattttaaacggattacgaca
caagatattattggacgcttagaattcattttaaaagaagaaaaaaccccttatgatgaa
aaagcgctaatgattgtggcgcgtgcagctgaaggtgggatgcgtgatgcgcttagccta
cttgaccaagtgatttcttatgggtcagaagaggtaaccgtggatgatgcgcttgaaatt
actggttccattgctcaaggattactgacaaagcttgtaagtgcggcttttgacggcgat
gctgcagaagcgatttcgacattgactgctctacttgctgaaggaaaagacccagtccga
cttgtggaagatttactagtgttctttagagatgtattgctgtatcaaaaagcaccaaat
ctagaagaaacgctagaacgagctttgattgatgatgagtttgtctcacttgctaaacga
gcgaattcgttcaagatatatgaatttgttaaaattttaaataccgcacagcaacaaatg
cgcttttctaatcatccaggtatttatgtggaagtagcgcttgttcagttaacacaagca
ggacaaacagttggtgaaagtgccgcacctgttgaagttgctagcggagatgtatcagct
ttaaaacaacaaatggagcaactgcaactagaacttcaaactctcaaaaaacaaatcgca
agtggagcgggagtggccccaactgagaagccagcacaaaaccggggtggctccaaaaaa
caaattaataacggtaaacaatttaaagcaccaattggtaaaattaatcatgtactaggt
gaggctaagaaagagaatttgcagttaattcgtggttgttggggtgaactattatccatg
ttaatggcgtctcaagcagcacttttaaatgatgcggaacctgtggctgcatctctagac
acttttgtgttaaaatttaagcatgagattcactgccaaatggcgatggataatccaaac
tttgtagaaaccattacgtcgagtattgcaaagcttacacaagttaattatacttttatt
ggaatcccagaagatcaatgggctgaagtaagagaaaatttcctgcatagtcatgtcgga
aacggggattcagaggaaggtgcaaatccagaagctagaaaaccagctgaagatccattt
gttttagaagcgacaaaactagttggtgaagatttgcttgaaattaaagattaa
DBGET
integrated database retrieval system
