Listeria ivanovii WSLC3009: AX25_01495
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Entry
AX25_01495 CDS
T03045
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
liw
Listeria ivanovii WSLC3009
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liw03016
]
AX25_01495
Enzymes [BR:
liw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AX25_01495
Transfer RNA biogenesis [BR:
liw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AX25_01495
Prokaryotic type
tRNA splicing ligases
AX25_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
SRP_TPR_like
Motif
Other DBs
NCBI-ProteinID:
AHI54842
LinkDB
All DBs
Position
315527..316705
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AA seq
392 aa
AA seq
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MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQLFAKDSKIRIMPDTHGGKGCVIGTTMTI
QDKIVPNLVGVDIGCGLHVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEG
IVAPIHHGWAARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAEYHQEVAYKRL
DILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGSDLNNYLNDMEIAQKF
AARNRYVMAETILKAMKWDKAVVSAFDCVHNYIDIDNHMLRKGATSAQLGEQIIIPLNMR
DGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEA
PKAYKSAKQLLADVEDTIEIQEIIKPLYNFKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattaaaaggaaaatataacgaagcgaaagtttttacagataatgtggacgac
aataccatcgggcaaattattacgctgtgtaatcaactgtttgcgaaggatagtaagatt
cggatcatgcccgacacgcacggtggtaaaggctgtgtgattggaacgacaatgacaatt
caagataaaattgtaccgaatttggttggagtagacatcggttgtggactgcatgtagtg
aaactaaaacctggaaagttaaaaatggactttgataagctagataaagttattcgcgaa
cgagtgccatccggaagcaaaacgcacgataagcctgtagatgaatttgatttggaaggt
atagttgcgccaattcatcacggctgggcagctagaagtatagggacgcttggtggcggg
aaccattttattgaagtgaatcaaggttctgatggtatttaccttgtaatccatagtgga
agtcgggtgcttggtaaagaaatcgcagaataccaccaagaagtagcttataaaagatta
gacatattgcgtaaagaattgaaattagacgcaactgctgcgaaaaaacgcggcaattta
gaaatggccaacaacttgaacggtgagcgtgagcaagtgaaattggattatgacttatct
tatgtgacgggctctgatttaaacaattatttaaatgacatggaaattgcacaaaaattt
gcagcgcgtaatcgttacgtcatggcagaaactattttaaaagcgatgaagtgggataaa
gcagttgtttcagcgtttgattgtgtgcataattacattgatattgataaccacatgctt
agaaaaggtgcgacatctgctcagcttggagagcaaattatcattccgcttaatatgcgc
gatggcagcattcttgcaacgggtaaaggaaatgcagattggaattactcggcgccgcac
ggggcgggaaggatgctaagtcgttctaaagcaaaagcgcaaatcagtttagaaagctat
caggcagcaatgaaagacgtttggactacttctgtttctaaaaaaacaattgatgaagct
ccaaaagcctataaatctgctaaacaattacttgctgatgtagaagatacgatagagatt
caagaaataattaaaccgttatacaatttcaaagcatga
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