Listeria ivanovii WSLC3009: AX25_06440
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Entry
AX25_06440 CDS
T03045
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX25_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liw03019
]
AX25_06440
03009 Ribosome biogenesis [BR:
liw03009
]
AX25_06440
Enzymes [BR:
liw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AX25_06440
Messenger RNA biogenesis [BR:
liw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AX25_06440
Ribosome biogenesis [BR:
liw03009
]
Prokaryotic type
rRNA helicases
AX25_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AHI55738
LinkDB
All DBs
Position
1298369..1299793
Genome browser
AA seq
474 aa
AA seq
DB search
MRTDMNNLNLSEEIKRAINELGYKEATPVQKEVIPVALTGKDIVAKSQTGSGKTAAFAIP
IAEQVIWEENKPQALIIVPTRELAMQVKTECTNIGRFKRIKAAAIYGQSPFAKQKLELSQ
KNHIVVGTPGRLLDHIEKGTLNVDKVAYLVLDEVDEMLSMGFIDQVEDILQFLPKKRQNL
FFSATMPEEMQDLIKRYQDDPIVIEMAAEKTNPITHIEMQTENKEKTLQDVLITENPDSA
IIFCNTKNQVDELSDLLQVNTAKIHGGLRQEERFRAMDDFKSGKSRFLIATDVAGRGIDV
ENVTLVINYDLPIEKENYVHRIGRTGRAGNSGKAISFVKTNENPLLRDMEDMLKITIEKK
RKPTIIEVKASEEAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTIS
KLEGITSEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRQLKVNEARKR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgacatgaataatttaaatttaagtgaagaaattaaacgagcaattaatgaa
ctaggatataaagaagcgacacctgttcaaaaggaagttatccctgttgcattaacagga
aaagacattgtggcaaaatcacaaacaggaagtggtaaaacagccgcatttgcgattcca
attgctgaacaagtcatttgggaagaaaacaaacctcaagcattaattatcgttccaact
agagagctagctatgcaggttaaaacggaatgcactaatataggtagatttaaacgcatt
aaagctgcagcaatttatgggcaatctccctttgctaaacaaaaattagaattaagccaa
aaaaatcatatcgtcgttggaaccccggggcgtttgttagaccatattgaaaaaggcaca
cttaacgtggataaagttgcttacttagttttagatgaagtagacgaaatgttaagtatg
ggattcattgatcaagtagaagatattttgcagtttttacctaaaaagcgccaaaatcta
ttcttttcggcaacaatgccagaggaaatgcaagatttaatcaaacgatatcaagacgat
cccattgttattgaaatggcagcagaaaaaacaaacccaatcacacatatcgaaatgcaa
acagagaataaagaaaagacgctccaagatgttttaatcacagaaaatccagatagtgcg
attattttttgtaacactaaaaatcaagtagatgaactaagtgacttactacaagtaaat
acagctaaaatccatggaggtttacgacaagaagagcgtttccgtgcgatggatgatttt
aaaagtggcaaatcgcgctttttaattgcaacagatgtagctggtcgtgggattgatgtg
gaaaatgtcacgctagtaattaattatgacttaccaatcgaaaaagaaaactatgtgcac
cgaatcggtcgtactggtcgcgcgggaaacagtggaaaagcaatcagttttgtcaaaaca
aacgaaaatcccttacttagagatatggaagatatgctaaaaatcacgattgaaaagaaa
cgtaaaccaaccattatcgaagtaaaggcaagcgaagaagctttccgcaagaaacaacaa
aaacgtccaaccatcaaaaaagctcgtggcgaaaagctgaataaaaatattatgaaactg
tactttaatggcgggaaaaagaaaaaaattcgagctgtggattttgtaggaaccatttca
aaattagaaggaattacatcagaagatatcggtattattactatagaagatcatgtgtca
tttgtagaaattcttaatggtaaaggaccagctgtgcttgaaatgatgcgttcgcgtaaa
gtaaaaggtagacagctaaaagtgaacgaagcaagaaagcgataa
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