Listeria ivanovii WSLC3009: AX25_06620
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Entry
AX25_06620 CDS
T03045
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
liw
Listeria ivanovii WSLC3009
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liw03032
]
AX25_06620
03400 DNA repair and recombination proteins [BR:
liw03400
]
AX25_06620
Enzymes [BR:
liw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AX25_06620
DNA replication proteins [BR:
liw03032
]
Prokaryotic type
DNA Topoisomerases
AX25_06620
DNA repair and recombination proteins [BR:
liw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AX25_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
JHBP
DUF2996
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
AHI55774
LinkDB
All DBs
Position
1328341..1330419
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLDLDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEAGNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSSMRSPQAVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVRTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGQ
VEWVKVIDEFYKQFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCNERALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaagtat
ttaggaaagaaatttaaagtgaaagcatccatgggacatgtaagagacttaccgaaaagt
cagatgggtgttgatacagaacatgactatgaaccaaggtatattactattcgtggtaaa
ggccctgttttaaaagaattaaagcaagccgctaagaaagctaaaaaagtctatctcgcg
gccgatccagatcgcgaaggagaagcaattgcatggcatttggccaacagtctagactta
gatcaatcagacaaattgcgagtggtatttaacgaaattacgaaagaggcagttaaagaa
tcatttaaaactcctcggaagatagatatggacttagtaaatgcacagcaagctaggaga
atattggaccgtttagttggttacaatatcagtccgattttatggaaaaaagtaaaaaaa
ggcttgagtgcaggtcgtgttcaatcaattgcacttcgaattattattgatagagaaaaa
gaaatcaataatttcaaaccagaagagtattggacaattgatggtaacttccttaaaggt
aagaaaaaattccaagctaatttttatggcgtaaatggtaagaagaagaagctttcaact
gctgatgatgtaaaagaagttatgtccgcaattaaagggaaatcattcgatgttacggat
gtaacgaaaaaagaacgacttagaaatccagctgcaccatttactacatctagtctacaa
caagaagcagcacggaaattaaattatcgtacacgtaaaacgatgatgcttgctcaacaa
ttatatgaaggtattacgcttggaaaacaaggtactgttgggttgataacctatatgcgt
actgactccacccgtattgcggattcagctattttagaagcaggtaattatattaaagaa
acctacggacctgaattttcccggaaccataagcgttctgataaaaatgcaaaaggtgct
caagatgcccatgaagcaattcgcccaacaagttcaatgagaagtccgcaagcagtgaaa
gaatatctgacgcgtgatcaacttcgcttgtaccgtttgatttgggaacgatttatcgct
agccaaatgacaccagctgttctagatacaatgcgtgtcgacttagacaacaatggtgtg
aattttagagctaatggatcaaaaatcaagtttcatggttttatgaaagtttatgtagaa
agcaatgatgataatacagaagaaaaagaaaatattttacctgatttgaaaaaaggcgat
aaggtacagtcggaatctcttgaacagcgtcagcattttactcagccacctccccgttat
acagaggcaaggttagttagaacgctggaagaaataggaattggccgaccttctacctat
tcacctacattagatacaattcagcggagaaactatgtatccttgactaataaacgtttt
attcctactgaactaggtgaaatcgtcaatgaaatgattgaagaatacttcccagaaatt
ttagatgtgaaattcacagctaatatggaaagtgagttagatgaagtagaacatgggcaa
gtagaatgggtcaaagtaattgatgagttttataaacaattcgagccaaatgtgattaaa
gcagatgccgaaatggaaaaaattgaaattaaagatgaacctgctggtatcgattgtgat
ctatgcggagcgccaatggtatataaaatggggaaatatggaaagttccttgcttgtagc
agattccctgattgtcgaaataccaaagcaattgtaaaagaaattggtgttacttgtcct
aaatgtgagaaagggcatgttatcgaaagaaagagcaagaaaaaacgaattttttatggt
tgcgaccgctatccagattgtgattacgtttcatgggataaaccagtagaacgagcttgt
ccaaaatgtaatgaacgagcacttgtagaaaagaaactgaaaaagggtgtacaagtacaa
tgtaccaactgcgattataaagaatcaacacaacaataa
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