Listeria ivanovii WSLC3009: AX25_06875
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Entry
AX25_06875 CDS
T03045
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
liw
Listeria ivanovii WSLC3009
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liw03016
]
AX25_06875 (truB)
Enzymes [BR:
liw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AX25_06875 (truB)
Transfer RNA biogenesis [BR:
liw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AX25_06875 (truB)
Prokaryotic type
AX25_06875 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Vault_4
DUF6210
DUF483
Motif
Other DBs
NCBI-ProteinID:
AHI55824
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All DBs
Position
1383127..1384041
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKEIEEISAEELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDMALTETNPTFRLEISCGKGTYIRTL
SVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQANNSEFLYPLEKGIESMEK
LVIDEEIHAKVLNGGLLPVSLFSSLQDEPRAALIFEDKLTAIYKPHPEKKDLWKPEKVIE
LQQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatcccactgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaaaattttacatacaaaaaaagtcggacatacaggtacgctcgatccagaa
gtagaaggcgtactcccgatttgtatcggacgtgccacaaaacttgctgaatatgtaact
gatgagggcaaagtatatgtagcagaaataacacttggcaaatcaactacaacagaagat
gcgactggcgagactgtcatgacaaaagagattgaagaaatttcagcagaagaacttcaa
gctgcacttactaaactgacggggaaaatcacccaaattccaccaatgttttcagctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggaatagaggtagaaaggcca
tccagacaagtggatatttattcattaatccgcttagatggtgatatggcgctaactgaa
acgaacccgactttccgcttagagatttcatgtggaaaaggaacttatattagaacgctc
tcggtaatgattggcgaattgttaggttatccagcccatatgtccaaactagaacgtacc
cgtagtggttttttcaaaaaagaagattgcctaactctagcggaaattgatgaaatgatg
caagcgaataatagcgagtttttatacccacttgaaaaagggattgaatcaatggagaaa
ttagttattgatgaagaaatacatgcgaaagttctaaatgggggcttattaccagtttct
ttatttagtagcctgcaagatgaacctcgtgcagcgcttatttttgaagataaattaacc
gcaatttataaaccgcatccagagaaaaaagacctttggaaaccagaaaaagtcattgag
ttacagcaagcatag
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