Listeria ivanovii WSLC3009: AX25_07550
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Entry
AX25_07550 CDS
T03045
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AX25_07550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liw03021
]
AX25_07550
Transcription machinery [BR:
liw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AX25_07550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AHI55952
LinkDB
All DBs
Position
complement(1521391..1522515)
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AA seq
374 aa
AA seq
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MSDKTQNTKPVAELNVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVG
EAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKINDPVRMYLKEIGRVDLLTA
DEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEK
FDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDP
SPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKL
RHPSRSKQLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaacacaaaacacaaaaccagttgctgaactaaatgttgagcaagtaaaa
gaagcccttatagaagaaggtaagaaaaaggggattttaacttacgcaaaaatcgctgcc
agattagctccatttacactagattccgatcaaatggatgagtatttagaacacgttggc
gaagcaggaattgaagtttctgatgatgctgatgatgaagatccagatgaaacagaactc
gtcaaagaggaaacagaatcctttgatttaacagatatgagtgtaccaccaggcgtgaaa
atcaatgatcccgtgcgtatgtacctaaaagaaattggtcgagtcgatttgttaaccgct
gatgaagaaattgctttagcgaaacgaattgaagctggcgatatcgaagcaaaaggtcgc
cttgcagaagccaacttgcgtctagtagtaagtattgccaaacgttatgttggtcgtggg
atgttatttcttgatttaattcaagaaggaaatatgggactaatgaaagccgttgaaaaa
ttcgactttaacaaaggatttaaattcagtacctatgcaacttggtggattcgtcaagcg
atcacccgtgctatcgcagaccaagctcgaacaatccgtatcccggtgcatatggtagaa
acaatcaacaaattaattcgagttcaacgctcgttactacaagatttagggcgcgatcct
tccccagaagaaattggagaagaaatggatttaccaacagaaaaagttcgggaaatcttg
aaaatcgctcaagaacctgtttcacttgaaacgccgattggcgaagaagatgattcgcac
cttggagatttcattgaagaccaagatgctacttcaccttctgaccatgcagcatatgag
ttattaaaagaacaattagaagatgtacttgatacgttaacggaccgcgaagaaaatgtc
cttcgtctacgctttggtttagatgatggacggacacgcactttagaagaagttggccgt
gtatttggagtaacccgtgaaagaatccgtcaaatcgaagcaaaagcattacgtaaatta
cgtcacccaagccgcagcaaacaattaaaagacttcctagaataa
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