Listeria ivanovii WSLC3009: AX25_07830
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Entry
AX25_07830 CDS
T03045
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AX25_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liw03400
]
AX25_07830
Enzymes [BR:
liw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AX25_07830
DNA repair and recombination proteins [BR:
liw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AX25_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA_16
UvrD-helicase
SKA2
AAA_12
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA_28
NPHP3_N
Zeta_toxin
AAA
DEAD
AAA_17
ABC_tran
TsaE
Motif
Other DBs
NCBI-ProteinID:
AHI56005
LinkDB
All DBs
Position
complement(1574086..1576479)
Genome browser
AA seq
797 aa
AA seq
DB search
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFP
ALHEQEVYTFYGKMQEHAKFGQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENI
VDTIGDDAITRILSDPSLLNNVPKLPSGAAESLLASLRENQGLEHVMVGLNEYGFGPQLS
MKIFQAYKQNAIEVLENNPYKLIEDVKGIGFHRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTFLLEESEGIRIDHAILMEQIEKLAEEQKIIMENTRVYMP
SLYYSESGFAYHVKRMLKQTQYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMS
PMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDGATFPVLLAAPTGRAAKRMSE
STGLPSMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPSHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPADF
AKNSADRSFFHCTVNQIGDVVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQE
IFNPNDTGRRKEVQFGELKYRIHDKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQDM
IVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLISEDVMLEQMTNKRILTIENITEI
DPMIGMEGITPNQFMAG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagaatctctcgctttatttgacacgccagaagagctttttatgaagggc
acgatgttgtccaccattttttataatgccgaaaacctcttttctgttgtgcgaattctt
gtcaaagaaaccaatgcagattgggatgaaaaagatattattgtgactggttttttcccc
gctttacatgaacaagaagtgtatactttttatgggaaaatgcaggaacatgccaaattt
ggacagcaatttaaagcagaacgttttaggaaagaaatgccgcaatctcgtgctggttta
attaattatctgtctggtgagctttttaaaggtattggcaaagtgactgcggaaaatatt
gttgatacaattggcgacgatgcaattacgcggattttatctgatccaagtttacttaat
aatgttccaaagttaccatctggtgctgcggagagcctccttgcttctttacgagaaaat
caaggcttagagcatgtgatggtcgggctaaatgaatatggatttggtccacaactttcg
atgaagatttttcaagcatataaacaaaatgctatcgaagtacttgaaaacaatccatac
aaattaattgaggatgtcaaaggtattggatttcaccgagcggatgagcttggtcggaaa
ttaggactaggaggaaatcatcctgaacgccttcgtgcgggaattttatttatgcttgat
tctgtatgcatgcaacaaggccatgtttatatggaacaagaagcgctacttgcagaagtg
acctttttgctagaagaaagtgaaggtattcgaattgatcatgctattttaatggaacaa
atagaaaagcttgctgaagaacaaaaaattatcatggaaaacacacgtgtctatatgcca
tctttatattattcggaaagcggctttgcttatcatgtaaaacggatgctgaaacaaaca
cagtatcaagagcaatttccgcagtctgagttcttgctggcacttggagagttagaagag
cgaattggtgttcattacggagattcgcagcgagaggcgttagagcaagctttaatgtcg
ccgatgcttgtacttactggtggaccaggaacagggaagactactgttattaaaggtatt
gtggaattatatgccgaattaaatggtgtaagtctagacccgcatgcttataaagatggc
gcgacgtttccagttctgttagcggcaccaactggacgagcagctaagcgaatgtctgag
tcaacaggacttccatcaatgaccattcaccgtttactcggtatgaatgggcaagagcaa
atggatgatgatgcagaaagattaattgatggtcggcttttaattgtagatgaaatgtcg
atggtggatatttggcttgctaaccaactatttcgtgcacttccttcgcatatgcaagta
gttttagtaggagaccaagaccaattgccatcagttggaccaggacaggtcttgaaagat
atacttcactcgaaacaaattccaaccgttgcgctttcagatatttataggcaaaaagat
ggatcttccattattgagatggctcataatattaaagaaggcatgttgccagctgatttt
gcgaaaaatagtgctgatcgttctttctttcactgtaccgtgaatcaaattggtgatgtc
gttgaacaagtcgtaaaaaatgccaaaaataaaggtttccgcgcaaaagatattcaagtt
ttagcaccgatgtatcgtggcccggctggaatcgatattttaaataaaaagctacaagaa
atttttaatcctaatgacactggcagacgtaaagaagtgcaatttggcgaattaaaatat
cgtatacatgataaagttttgcagttaataaatcaaccggaaaaaaatgtctttaacggc
gatatcggggaaatagtatcgattatttatgcgaaggaaaacaccgaaaagcaagatatg
attgttgtgcaatttgatcaaaccgaagtatcctattaccggcaagaatttaatcaattg
acgcatgcttattgttgttctattcataaagcacaaggtagcgagtttcccattgtgatt
atgccaattgttcgtagctattaccgaatgttacgacgtgacttgttatatacgggtgtc
actcgaagcaagcaatttttgattctttgcggtgaagaagaggcgtttcgaatgggtgtt
gagcgtgtcgatgaaaacaaacgtaatacgacgctttcagaacgtttaataagtgaagat
gttatgctcgaacaaatgaccaataaacgaattttaactatcgaaaatattaccgaaata
gatccgatgattgggatggaaggaataacccccaaccaatttatggcaggctaa
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