KEGG   Listeria ivanovii WSLC3009: AX25_12845
Entry
AX25_12845        CDS       T03045                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
liw  Listeria ivanovii WSLC3009
Pathway
liw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:liw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AX25_12845 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:liw03400]
    AX25_12845 (uvrA)
DNA repair and recombination proteins [BR:liw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AX25_12845 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AX25_12845 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 RsgA_GTPase AAA_29 AAA_23 AAA_33 DnaJ_CXXCXGXG AAA_22 AAA_21 NACHT Viral_helicase1 cobW DUF2972
Other DBs
NCBI-ProteinID: AHI56913
LinkDB
Position
complement(2587329..2590199)
AA seq 956 aa
MNKDKIVIQGARAHNLKNIDLEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHP
VCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIR
VDGEIYDINDEMEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMG
DKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDIDTVIPDRSLS
LNEGAIIPWRPISSQYYPQMLASACKEFGIDMDKPLEKLSKEDLDIILNGSKEKEFYFEY
KNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLS
VKVNDHHIGQISEFSINEALAFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTM
SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNT
LIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPV
PATRRKGNGLELEIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARK
LNRNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAK
VRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKG
KNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYL
IDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPILERDKERTAAKITSVQEK
NT seq 2871 nt   +upstreamnt  +downstreamnt
ttgaataaagacaaaatagtaattcagggtgcaagagcccataatttaaaaaacatcgat
ttagaaattccaagagataagttagttgttatgactggattatccggatcaggtaaatct
tcgctagcttttgataccatttatgcggaggggcaaagacgctatgtagagtcgttgtct
gcttatgcacgccaatttttaggacagatggataaaccagatgtggacttaattgaaggc
cttagtccagctatttctattgaccaaaaaacaactagtcgtaatccgcgttctacagtt
ggaacagtaacagaaatccatgattacttgcgactgctctatgctcgagttggacatcca
gtttgtcctaaccacggcatcgaaattacttcgcaaaccattgaacaaatggtggatcgt
gtactggaatatccagaaaaaacacgtatccaaattatggcgcccatcgtttctggtaaa
aaaggcacacacaaaaaaactatcgaagaaattaaaaaagaaggctatgtaagaattcgt
gttgatggagaaatatatgacatcaatgacgaaatggaaatcgaaaaaaacaaaaagcat
tctatcgaaataatcatcgaccgaattgtcattaaagaaggaataaatactcgtttatat
gattcgatagaggctgctcttcgcttagcagatggttacgcagtggtggatatcatgggg
gataaggaattactatttagtgaacattatgcttgtccatactgtggtttctcagttgga
gaattagaaccaaggatgttctcttttaatagcccgtttggtgcttgcccaacttgtgat
ggactaggaaccaagctagaagttgatatagatactgttattccagatagaagcttatca
ctaaatgaaggggcaattatcccttggcgtccaatcagctctcagtactacccacaaatg
ttagcttctgcttgtaaagagtttggaattgatatggataagccacttgaaaaactatct
aaagaagatttagatattattttgaatggctcaaaagagaaagagttttatttcgaatac
aaaaatgattttggtatgacgcgcgaaacctggattccgttcgaagggatacttcctaat
atcgaacgtcgctaccgggaaacaaattctgacttcacgcgcgaccaaatggcacaatac
atgacagatttaccttgcccatcttgtaaaggctatcgcttaaaggaagagacactttca
gtcaaagtaaatgatcatcatattgggcaaatcagtgaattctcgattaacgaagcgcta
gcattttttgatggcttagagctctctgaaaaagagacacaaatcgctgctccaattttt
aaagaagttcgtgctcgactagggttcttaaaaaatgttggcttagattacttgacgatg
agtcgcgctgcaggaactctgtcaggtggagaagcacagcgtatcagactagcaacccaa
attggttcgaggttaacgggtgtcctttatattcttgatgaaccatcgattggacttcat
cagcgtgataatgaccgtttaattagtacattacaaagcatgcgtgacattggcaataca
cttattgtggtcgagcacgatgaagataccatgatggcggctgactatttgattgatatt
ggacctggtgcgggcgaacatggcggtcggattgttgctgcgggaactccagaagaagtg
gcaaaaaataagaattccattactggtgattatttatccggcaaaaaattcattccagtt
ccagcaactcgtagaaaaggaaatggtcttgaattagaaataatcggtgcaaaagccaat
aatttaaaaaatgttaatgctaaaatcccactagcaacattctcatgtgtcacaggtgtt
tctggttctggcaaaagctcactagtaaatgaagtacttcgaaaagcgctagcgagaaag
ctaaatagaaatcatgctaaacctggagagcacaaagaaatcaaaggaattgaaaactta
gaaaaaatcattaacattgatcaatctccaattggcagaaccccacgctcaaatccggcg
acttacacaggcgcatttgatgatattcgtgatctttttgcaagcaccaatgaagcgaaa
gttcgtggctataaaaaaggtcgtttcagcttcaacgtaaaaggcggccgctgtgaagct
tgtaaaggtgacggaatcattaaaattgaaatgcactttttaccagatgtatacgtacct
tgcgaagtttgtcatgggaaacgatacaatggtgaaacgttagatatccgttacaagggt
aaaaatattgcagaagttttagaaatgacagtagaagaaggcttggagtattttacaaac
caaccaagaattgctcgaaaactgcaaacaattgtagatgtgggacttggatatattcgc
ctgggtcaacctgcaaccacactatcgggcggtgaagcacagcgggtgaaactagcttct
gaacttcataaacggagtaacggaaaatcattctatattcttgatgaaccaacgacaggt
ctgcatgcggatgacatcggacggcttctaaaagtgctccaaagacttgtagaagaaaat
ggagacacagtccttgtaattgaacataatctagatgttatcaaacaagctgattatttg
attgacttaggaccagaaggcggcgatggcggtggccaaattattgcaactggaactcct
gaaaaaatcgctcgttccaaaaaatcatacacaggtaaatacttaaaacccattttagaa
cgtgataaagaaagaacggcagcaaaaattacttctgttcaagaaaaataa

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