Listeria ivanovii WSLC3009: AX25_14220
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Entry
AX25_14220 CDS
T03045
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw03030
DNA replication
liw03430
Mismatch repair
liw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AX25_14220
03430 Mismatch repair
AX25_14220
03440 Homologous recombination
AX25_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liw03032
]
AX25_14220
03400 DNA repair and recombination proteins [BR:
liw03400
]
AX25_14220
Enzymes [BR:
liw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AX25_14220
DNA replication proteins [BR:
liw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AX25_14220
DNA repair and recombination proteins [BR:
liw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AX25_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
AAA_24
AAA_19
PIF1
AAA_assoc_2
AAA_16
AAA_7
Mg_chelatase
AAA_2
AAA_14
Rad17
B12-binding_2
DUF815
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHI57154
LinkDB
All DBs
Position
complement(2842236..2843969)
Genome browser
AA seq
577 aa
AA seq
DB search
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAK
AINCEHGHDGEPCNECDICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITT
QDIIGRLEFILKEEKTPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVDDALEI
TGSIAQGLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPN
LEETLERALIDDEFVSLAKRANSFKIYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQA
GQTVGESAAPVEVASGDVSALKQQMEQLQLELQTLKKQIASGAGVAPTEKPAQNRGGSKK
QINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASLD
TFVLKFKHEIHCQMAMDNPNFVETITSSIAKLTQVNYTFIGIPEDQWAEVRENFLHSHGG
NGDSEEGANPEARKPAEDPFVLEATKLVGEDLLEIKD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaggctttgtatcgggtttttcggccgcagtcgtttcaggatgttgtggga
caggaacatgtgacgaaaacgcttaagaatgccattgtgcaaaataaaacttcgcatgct
tatttattctcgggacctcgggggactgggaagacgagtgcggcgaagatttttgcgaag
gcgattaactgtgaacacggtcatgacggagagccttgtaatgaatgtgatatttgtaag
ggcacaacggatggctctataccagatgttcttgaaattgatgctgccagtaataacggg
gttgaagagattcgagatatccgggaaaaagtaaaatatgcgccaactgtggcgaaatat
aaagtatatattatcgatgaagtgcatatgttatcgacgggagcgtttaatgcgctatta
aaaacactagaagaaccgccaaaacatgtcatttttattttggcaacaacagaacctcat
aaattaccactaacaattatttcccgtgtacagcgatttgattttaaacggattacgaca
caagatattattggacgcttagaattcattttaaaagaagaaaaaaccccttatgatgaa
aaagcgctaatgattgtggcgcgtgcagctgaaggtgggatgcgtgatgcgcttagccta
cttgaccaagtgatttcttatgggtcagaagaggtaaccgtggatgatgcgcttgaaatt
actggttccattgctcaaggattactgacaaagcttgtaagtgcggcttttgacggcgat
gctgcagaagcgatttcgacattgactgctctacttgctgaaggaaaagacccagtccga
cttgtggaagatttactagtgttctttagagatgtattgctgtatcaaaaagcaccaaat
ctagaagaaacgctagaacgagctttgattgatgatgagtttgtctcacttgctaaacga
gcgaattcgttcaagatatatgaatttgttaaaattttaaataccgcacagcaacaaatg
cgcttttctaatcatccaggtatttatgtggaagtagcgcttgttcagttaacacaagca
ggacaaacagttggtgaaagtgccgcacctgttgaagttgctagcggagatgtatcagct
ttaaaacaacaaatggagcaactgcaactagaacttcaaactctcaaaaaacaaatcgca
agtggagcgggagtggccccaactgagaagccagcacaaaaccggggtggctccaaaaaa
caaattaataacggtaaacaatttaaagcaccaattggtaaaattaatcatgtactaggt
gaggctaagaaagagaatttgcagttaattcgtggttgttggggtgaactattatccatg
ttaatggcgtctcaagcagcacttttaaatgatgcggaacctgtggctgcatctctagac
acttttgtgttaaaatttaagcatgagattcactgccaaatggcgatggataatccaaac
tttgtagaaaccattacgtcgagtattgcaaagcttacacaagttaattatacttttatt
ggaatcccagaagatcaatgggctgaagtaagagaaaatttcctgcatagtcatggcgga
aacggggattcagaggaaggtgcaaatccagaagctagaaaaccagctgaagatccattt
gttttagaagcgacaaaactagttggtgaagatttgcttgaaattaaagattaa
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