Limnospira indica: H2674_13985
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Entry
H2674_13985 CDS
T10214
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lix Limnospira indica
Pathway
lix03410
Base excision repair
lix03430
Mismatch repair
lix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H2674_13985 (recJ)
03430 Mismatch repair
H2674_13985 (recJ)
03440 Homologous recombination
H2674_13985 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lix03400
]
H2674_13985 (recJ)
DNA repair and recombination proteins [BR:
lix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H2674_13985 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H2674_13985 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H2674_13985 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
OTCace
Toprim
Motif
Other DBs
NCBI-ProteinID:
QNH55571
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All DBs
Position
3162129..3164189
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AA seq
686 aa
AA seq
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MEDKPPITTEPLLPKQRWYIFPERPEIAQSLSETTGVHPIIAQILINRGIETKEQAEAFL
NPQSQTLPEPMEEFPDLPKTVQLLQNAIDNQQKIAICGDYDADGMTSTALLIRAISKLGA
DITSAIPSRMQEGYGINNRIVEEFHDQGISIIITVDNGISAIAPVARAKELGLTVIITDH
HDLPPQLPNADAILNPKLLPKTSPYYGLAGVGVAYILALSLAKLRGEWESLRWQLLELFT
LGTIADMAPLNGVNRRWVKRGLKILPESKIAGVQALIQIAGLANQQPNLTNSTTSMKPED
IGFRLGPRINAIGRIGHPQVVIELLTTDHMGTALEQAKECEETNLLRKQLCADIEQEAIA
WYENSNINLEQERVLVPCQKKWHHGVIGIVASRLVERYGVPVFICTYEDEENLRGSARGI
PEFHVFEALQFCQDLLGKFGGHKAAGGFSLPAANLPKFKQRLSEFAHQCLQVEHLRPLIN
VDVSINLRDINYKLYDQIDKIQPCGIANSEPVFWTPKLRIVHQKIVGKSHIKLTLSQDLP
PEITMAVLPTISAIAWRWADYFPLPSPLDFAYKLRKNTWNNQTAIELEIVGVRLPETFVP
LHRRLAEFNYCDRTYKCNITPIGDNWELRIRNQKGEVLAIQPGQKTGLLGISRSAAKTVD
ISHPFFMKLIEAAQAALGVKLPFLNN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacaaacctcccatcaccacagaaccactactaccaaaacagcgctggtatatt
ttcccagaacgccccgaaattgcccagagtctatctgaaaccaccggggttcaccctatt
attgcccaaatcctgatcaaccggggaatcgaaaccaaagaacaagccgaagccttcctt
aacccccaatcccaaactctcccggaacctatggaggagttccccgacttacccaaaact
gtccaattgctgcaaaatgccattgataatcaacaaaaaattgccatctgtggggactat
gatgctgatgggatgaccagtacagcgttattaattagagccatttctaaattaggcgca
gatattacatcagcaattcctagtcggatgcaagaaggctatggtatcaataatcgcatt
gtggaggaatttcacgatcagggtatctccataattatcactgtggataatggtatttcg
gcgatcgctccggtggctagggcgaaagaattggggctaactgtgattatcaccgaccac
catgatctgcctccccaactccctaacgctgatgctattctcaatcccaaattactgccc
aaaacttccccctattatggcttggctggagttggtgtcgcttatatattagccctatcc
ttagcgaaacttagaggagaatgggagagtttgcgctggcagttattggaactatttacc
ctagggactatagctgatatggctcccttaaatggagtgaatcgccgttgggttaaacgg
gggttaaaaattctgccggagtctaaaattgcgggagtccaagcattaattcaaatagca
ggattggctaaccaacagcctaatttaaccaattctactacttcgatgaaaccagaagat
atcggctttcgcctcggacctcggattaatgcgatcggacgcattggacatccccaggtg
gtgattgaactgttaactactgaccacatgggaaccgcgttagaacaggcgaaagagtgc
gaagaaactaacctactacggaaacagctttgtgcggatattgaacaggaagctattgct
tggtatgaaaatagtaatattaaccttgaacaagaacgggttttagttccctgtcaaaaa
aaatggcatcatggagttattggaattgtggcttcccgactggtggaacgctacggagtt
ccggtatttatttgtacttatgaagacgaggaaaatctgcggggttcggcgcgggggatt
ccagaatttcatgtgtttgaagcactgcaattttgtcaagatctcctcggtaaatttggc
ggacataaagcggctggtggcttttctttaccggcggctaatttgcctaagtttaaacag
cgcttgagtgaatttgctcatcaatgtctgcaagtagaacatctccgacctttaattaat
gttgatgtgagcataaatttgagagatattaactataaattatatgaccaaattgataaa
atacaaccctgtgggattgccaatagtgagccagttttttggactcctaagctgcgaatt
gtccatcaaaaaatagtcggcaaaagtcatattaaactaactttatctcaagatttacca
ccggaaatcaccatggctgttttacctactatatctgcgatcgcctggcggtgggctgat
tatttccccctcccttcccccctggattttgcttataaattacggaaaaatacctggaat
aatcaaacggcgatcgagttagaaattgtgggtgtgcgacttccagaaacctttgttcct
ctacatcgccgcctagctgaatttaattattgcgatcggacttacaagtgtaatattact
cctattggagacaactgggaattaagaattcgtaaccaaaagggagaggttctagctatt
caacctggacaaaaaaccgggttattaggaattagtcgatccgcagccaaaactgttgat
atttctcaccccttttttatgaaattaatcgaagccgcccaagccgccctgggtgtaaaa
ttaccctttttgaacaattaa
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