Limnospira indica: H2674_17735
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Entry
H2674_17735 CDS
T10214
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lix Limnospira indica
Pathway
lix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2674_17735 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lix03019
]
H2674_17735 (recQ)
03400 DNA repair and recombination proteins [BR:
lix03400
]
H2674_17735 (recQ)
Enzymes [BR:
lix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H2674_17735 (recQ)
Messenger RNA biogenesis [BR:
lix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2674_17735 (recQ)
DNA repair and recombination proteins [BR:
lix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H2674_17735 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QNH56179
LinkDB
All DBs
Position
complement(3982491..3984710)
Genome browser
AA seq
739 aa
AA seq
DB search
MSSFPPPLAQPQSLQQCLKQYFGYDSFRPGQQEIIEQVLQKRDVLAIMPTGGGKSLCFQL
PALLKPGLTLVVSPLIALMQDQVEALKDNGIGATFLNSTVDIHEARQRESAILQGQIKLL
YVAPERLLSPQFLEFLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHV
PAIALTATATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFPQLLKVIES
MSGSGIIYCSSRKRVEEVALKLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATI
AFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ
KPDVDEQRIARQQLRQVIDYAESTECRHRIQLRYFGEEFPGNCGTCDNCCHQRPMEDWTV
EAMKFLSCVARCRERFGMSYIIDVLRGAKNQRVLSRGHDKLSTYNIGRDRTVDEWKMLAR
SLLHQGLLDQTNDGYSILKLNNLSWEVMKRQREVKIAVVRDRQLPQQTWSMAADVKMLLE
HLRQVRKQLADQNDIAPYKIFSDSTLGLMARERPQTKQDLLRLSGVTAYKVQHYGQQFLN
AIHQYCLEQGIPLKPTKPPLPAVSSSSISKWYHVSPTVLQTWELFKQGLNVEEIAYQRGL
KSTTIYGHLADLIANNYGDIDINTLVSPERQQVILEAIAILGDEHLTTIYEHLGKAYSYG
EIQLVRALWRSQNSPDIEF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttttccgccacctctagcgcaacctcaatccctccaacaatgccttaaacag
tattttggctatgacagctttagaccaggacaacaggagattatagaacaagtgctgcaa
aagcgggatgtactcgcgattatgcctacagggggtggaaaatccctgtgctttcaactt
cccgctctcttgaaacccggtctgacattggtggtttcgcctttaatcgctttaatgcaa
gaccaggtagaagcgctaaaagataatggtattggggcgacatttctgaatagtacggta
gatattcacgaagcgcgtcagcgagagtcagctattctacaaggtcaaattaagctgctt
tatgtagcaccggaaaggttactatctcctcagtttttagagtttttagaccgccttgag
gcggcatttggcatatcaactctggtaattgatgaagctcattgtgtctcggattggggt
cacgattttcgaccagaatatcgacaaattcaacaggtgcgatcgcgttatccccacgtc
ccagcgatcgctctcacggctacggctacggaacgggtcagatttgatataattaaacaa
attgtcctcaaacaaccttatgttcacgtcgccagtttctaccgttctaatctctactat
caggtaatccctaaacaaccgaaaaaacggttccctcaactattaaaagtaattgaatcg
atgtcaggttcaggaattatttactgttccagtcggaaaagggtggaagaagtcgcatta
aaattacaacataataatatcccagccctcccctatcatgcgggaatggcggatagcgat
cgcctagaaagtcatacccgttttatccgagatgatgtccgaattatcgtggctactatc
gccttcggtatgggtatagataagccagatgtccggttcgttatacactacgatttaccg
aaaagtttggaaaactattaccaagagtcaggacgtgctggacgggatgggcaaccggct
caatgtctgctattttttagttatggggatatgaaaaccattgaatatttgattgagcaa
aagcctgatgttgatgaacaaagaattgcgcgccaacagttgcgacaggtaattgattat
gctgagtctaccgagtgtcggcaccgcattcaactgcgctattttggagaggaatttccc
ggtaattgtggcacctgtgataattgttgccatcaacgacctatggaagattggacagtg
gaagcaatgaagtttctatcctgtgtggcgcggtgtcgggaaaggtttgggatgagttat
attattgatgtgttgcggggtgctaaaaatcaaagggttttgagtaggggacatgataaa
ctttccacctataatataggacgagaccggactgttgatgagtggaaaatgttggcgcga
tcgcttttgcatcaaggactgttagaccagactaatgatggctattctattttgaagtta
aataacctcagttgggaggtgatgaaaagacagcgggaagtcaaaattgcggtggtacgc
gatcgccaacttccacaacaaacttggtctatggcggcggatgttaaaatgttattagag
catctccgtcaagttcgtaaacaactggctgaccaaaatgatattgctccctataagatt
ttttccgattcgactttggggttaatggcgcgagaacgtccccaaactaaacaggatctg
ttgagactttctggggtgactgcttataaggttcaacattatggtcagcagttcttaaat
gctatccatcaatattgtctggaacaaggtattcccctcaagcctactaaaccgccatta
cctgctgtttcatcatcatctatctctaagtggtatcatgtctcccctactgttctgcaa
acctgggagttatttaagcagggtttaaatgtggaagagatcgcttatcagagaggctta
aaatctactacgatttatggtcatttggcggatttaattgctaacaattatggcgatatc
gatattaatacattggtatctcctgaacgacaacaggtgattttagaagcgatcgctatt
ttgggagatgaacacctaacaacaatttatgaacatctaggaaaagcctacagttatggg
gaaattcaattagttagggctttatggcgatcgcaaaattcccccgatattgagttttga
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