Limnospira indica: H2674_18525
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Entry
H2674_18525 CDS
T10214
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lix Limnospira indica
Pathway
lix00061
Fatty acid biosynthesis
lix00071
Fatty acid degradation
lix01100
Metabolic pathways
lix01212
Fatty acid metabolism
lix02024
Quorum sensing
lix04146
Peroxisome
Module
lix_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lix00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H2674_18525
00071 Fatty acid degradation
H2674_18525
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H2674_18525
09145 Cellular community - prokaryotes
02024 Quorum sensing
H2674_18525
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lix01004
]
H2674_18525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lix04147
]
H2674_18525
Enzymes [BR:
lix01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H2674_18525
Lipid biosynthesis proteins [BR:
lix01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H2674_18525
Exosome [BR:
lix04147
]
Exosomal proteins
Exosomal proteins of breast milk
H2674_18525
Exosomal proteins of breast cancer cells
H2674_18525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QNH60302
LinkDB
All DBs
Position
complement(4162210..4164153)
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AA seq
647 aa
AA seq
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MDNSNLTAQYQSVQSLPEIWPILAQQIPQQVALFNPHSQPEVQITYSDLWTQIQQFAAGL
QQLGVEPAEDLPNRVALFADDSPRWMIADQGILTAGAANVVRGATADPQELAYILQNSGS
TGLVVDNLALLHKLEKAIQDLPIRFVVLLSDEDITAEDSLSIPIVNFSQLMTKGEDMTLL
NPPTTKLEDLATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWH
SLGRSGQYYFLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPA
TRQKLVNFFFGMSNRYIQARRIVQKLTIPGQGSNQNSSTALAKLQTILLTPVHALGDKLI
YQKVRQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLR
GSAGRPIPETEIRIIDPETRQTCEPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFD
TGDLGWLTPQKDLVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQDQKSLG
ALIVPNLDALKQWASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQVKNRPS
FRPDDRIGQFRLILEPFSIDNGLLTQTLKIKRPVVMERYRDMIDEMY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggataactctaacctaaccgcccagtatcaatctgttcaatccttaccagaaatttgg
ccaattctcgcccaacagatcccgcaacaagtcgccctatttaacccccacagtcagcca
gaagtacaaatcacctatagcgacctgtggactcagatccaacaatttgcggccggactg
caacaattgggagttgaacccgccgaggacttacccaatcgcgtcgccttatttgctgat
gatagtccccggtggatgattgctgatcaaggtattctcaccgccggagctgctaatgtg
gtgagaggtgcgaccgccgaccctcaagaactcgcctatattctccaaaatagtgggagt
acggggttagtagtcgataacctagccttactgcacaagttagaaaaagcgatccaagat
ttgccgattcggtttgtggtgttactgtcggatgaagacataacggctgaggatagccta
agtatacccattgtcaactttagccaactgatgactaagggtgaggatatgactttgtta
aatccccccactaccaaactggaagatttagcgactctgctttatacctctgggacaacc
gggaaacccaagggggtgatgttaactcaccggaattttttgcaccaactgattactatt
gctgatgtgattgcgccgcaaccgggggaaattgtcctgagtattctgccgacgtggcat
agtttggggcggagtggacaatattattttctgtcccggggaaccatggtgatttatact
aatatccgctattttaagcaggatttgcaggagtttaagcctcagtatatggttagtgtg
cctcggatttgggaatcgatttatgaggcggcgcagaagcagtttcgtgatggacccgcc
acccggcaaaagttggttaatttcttctttgggatgagcaaccgctatattcaagcccgc
cgcattgtacaaaaattgacaattcccggacaaggtagtaaccagaactcatccacagct
ttggctaaattgcaaactattctgttaactcctgttcacgccttgggggataaattgatt
tatcagaaggtgcggcaggctgtggggggaaaactcaagtttgctattagtggtggtggg
tccctagccatgcacttggaaaatttctatgaaattgtgggaattgacctgttggtgggt
tatgggttgacggaaactgctccggttttgacggcgcgacgacctagccataatttacgg
ggttctgcggggcgacctatccctgaaacggaaattcggattattgacccggagactcgc
caaacctgtgaaccgggatataaggggttggttttggcgcggggtccccaggtgatgacg
ggctattttcaaaatcctgaagccactgataaggctattgacccggaggggtggtttgat
acgggagatctcggttggctgactcctcagaaagatttggtgttgacgggacgagcaaaa
gatacgattgtgttaactaatggggagaatatcgaacctcaaccgattgaggatgcttgt
gttcgtagtccctatattgaccaaatcgttttggttggtcaagaccagaagtccctggga
gcgctaattgtgcctaatttggatgcgctgaaacagtgggctagtggacagggtttgcat
ctgcaagtacctggggaagaacaacagggggaaactgaaaatgcgatcgctatcgatagt
cagcctatacaaagtctgtttcgtcaggagttgaaccttcaggtcaaaaaccgccctagt
ttccgacctgatgatcgcattggtcagtttaggttgattttggaaccctttagtattgat
aatggcctactgacccagactttgaaaatcaagcgcccggttgtaatggaacgttaccgc
gatatgattgacgagatgtattaa
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