Limnohabitans sp. YIMB22184: ACHEXL_04285
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Entry
ACHEXL_04285 CDS
T11648
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
liy Limnohabitans sp. YIMB22184
Pathway
liy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
liy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACHEXL_04285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liy03400
]
ACHEXL_04285 (uvrB)
DNA repair and recombination proteins [BR:
liy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACHEXL_04285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACHEXL_04285 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
AAA_16
UvrD-helicase
FlaG
Motif
Other DBs
NCBI-ProteinID:
XOZ92837
LinkDB
All DBs
Position
902137..904254
Genome browser
AA seq
705 aa
AA seq
DB search
MPEVPVVEVVSDADKYAAGKFVSYPGSPFELYQPYPPAGDQPVAIEELVEGVHDGEVFQT
LLGVTGSGKTFTMANVIAQLGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYY
QPEAYVPQRDLFIEKDSAINEHIEQMRLSCTKSIMERRDVVIVATVSAIYGIGEPESYHR
MIMTLRTGDKLGQREVIAQLIRMQYQRNDMEFSRGKFRVRGDTIDVFPAEHSELAIRIEL
FDDEIDSLQLFDPLTGRIRQKIPRFTVYPSSHYVTPRDKVLAAVETIKLELAQRLKELVG
MGKLVEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAAPGDPPSTLTDYMPPDAIMF
LDESHQMIGQLNAMYNGDKARKTTLVEYGFRLPSALDNRPLKFEEFEKRMRQCIFVSATP
ADYEKTHAGKVVEQVVRPTGLVDPVVEVRPATHQVDDVLQEIRIRVDKNERVLITTLTKR
MAEQLTDYLSDNGVKVRYLHSDVDTVERVEILRDLRLGAFDVLVGINLLREGLDIPEVSL
VAILDADKEGFLRAERSLIQTIGRAARNLNGRAILYADRITESMKKAMGETERRRIKQLA
HNEAMGITPQSIVKKVKDLIDGVYSEKSGKEAERLEQAALQRAKVEDMSEKDIAKAIKQL
EKQMMEHARNLEFEKAAQVRDQLTILKEQAFGATGGDNVVPLIRA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaagttcctgttgttgaagttgtgtctgatgcggacaagtacgcagcggggaag
ttcgtcagttaccccggctccccgtttgagctgtaccagccctatccgcccgcaggcgac
cagccggtcgccatcgaggagttggtggaaggggtgcacgacggcgaggtgttccagacc
ctgctgggcgtgaccggttcgggcaagaccttcaccatggccaacgtgatcgcccagctg
gggcggcccgccatcgtgtttgcgcccaacaagacactggctgcgcagctgtacagcgag
ttccgcgagtttttccccaagaatgcggtcgagtatttcgtcagttactacgactattac
cagcccgaggcctatgtgccgcagcgcgatttgttcatcgaaaaagactcggccatcaac
gagcacatcgagcagatgcggctgtcgtgcaccaagagcatcatggagcggcgcgatgtg
gtgatcgtggccaccgtgtcggccatctacggcattggcgagcccgagagttaccaccgc
atgatcatgacgctgcgcacgggcgacaagctgggtcagcgcgaagtgatcgcgcagctg
atccgcatgcagtatcagcgcaacgacatggagttcagccggggcaagttccgggtgcgc
ggcgacacgatcgacgtcttcccggccgagcattcggagttggcgattcgcatcgagctg
tttgacgacgagatcgacagcctgcagctgtttgaccccctcaccggacgtatccgccag
aagattccgcgcttcacggtctacccgtccagccactacgtgacgccacgcgacaaggtg
ctggcggcggtcgagaccatcaagctggagctggcccagcgcctcaaagagttagtgggc
atgggcaagctggtcgaagcgcagcggctggagcagcgcacccggtttgatctggaaatg
ctgtccgaagtcgggcattgcaagggcattgaaaactacacccgccatttgtcgggtgca
gcgcctggcgacccgcccagcacgctgaccgattacatgccgcccgacgccatcatgttc
ctggacgagagccaccagatgattggccagctgaacgccatgtacaacggcgacaaggcg
cgcaagaccacgttggtggaatatggttttcggctgcccagcgcgctggacaaccgcccg
ctcaagttcgaagagtttgaaaagcgcatgcgccagtgcatttttgtgtcggccaccccc
gccgactatgaaaaaacgcatgcgggcaaagtggttgagcaggtggtgcgtcccactggt
ttggtggaccctgtggtggaggtgcgccctgccacgcaccaggtcgacgatgtgctgcag
gaaatccgcatccgggtggacaagaacgagcgcgttctgatcacgacgctcaccaagcgc
atggccgagcaactgaccgattacctgagcgacaacggcgtgaaagtgcgctacctgcac
agcgatgtggacaccgtggagcgggttgaaattttgcgtgatctgcgcttgggtgctttc
gacgtgctggtgggcatcaacctgctgcgcgagggcctggacattcccgaggtgtcgctg
gtggccattctggacgcggacaaggaaggctttttgcgggccgagcgcagcctgatccag
accattggccgcgccgcccgcaacctgaacggccgggcgattttgtacgccgaccgcatc
accgagtccatgaaaaaagccatgggtgaaaccgagcggcggcgcatcaagcaattggcg
cacaacgaggccatgggcatcacgccccagagcatcgtcaaaaaagtcaaggatctgatc
gacggcgtgtacagcgaaaaatcgggcaaggaagccgagcgactggagcaggccgcgctg
cagcgggccaaggtcgaggacatgagcgaaaaggacatcgccaaagccatcaagcagctc
gaaaaacaaatgatggagcacgcccgcaacctcgagttcgaaaaggccgcccaggtgcga
gaccagttgaccatccttaaagagcaggcctttggtgccacaggcggcgacaacgtcgtg
cctttgattcgggcttaa
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