Lichenihabitans sp. PAMC28606: LGH83_00405
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Entry
LGH83_00405 CDS
T07621
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGH83_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liz03019
]
LGH83_00405
Messenger RNA biogenesis [BR:
liz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGH83_00405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
UDL94784
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All DBs
Position
complement(86626..87135)
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AA seq
169 aa
AA seq
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MSPQPDLPYRPNAGIALFNRAGLVFAGRSRGDGPETVRGDFEWQMPQGGIDPGEDLVAAA
RRELMEETSIGDADFLAATDEWWPYDFPAYDGPWHHLCAFRGQTQRWVAFRFTGDESRID
VLDPIGGVRPEFFDWAWLPLASLPAKVMPHKRASYERVVAAFGRFAVPV
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcaacccgaccttccctatcgcccgaacgccggcattgccctgttcaatcga
gccggtctcgttttcgcgggtcgtagccgtggggacggaccagaaacggtgcggggtgat
tttgaatggcagatgccgcaaggcggtatcgaccccggcgaggatctcgtggcggcagcc
cgacgcgagttgatggaagaaaccagcatcggcgacgccgacttcctggccgcaacggac
gagtggtggccgtatgactttcctgcctacgacgggccatggcaccacctctgcgccttc
cggggccagacgcaacgatgggtggcgtttcgcttcacgggggatgaaagcagaatcgac
gttctcgacccgatcggcggcgtccgacccgagttcttcgactgggcttggctccctctt
gcgtctttgccggccaaagtgatgccgcataagcgagcgagttatgagcgtgtcgtcgcg
gcgttcggccgctttgcggtaccggtctga
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