Lichenihabitans sp. PAMC28606: LGH83_00420
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Entry
LGH83_00420 CDS
T07621
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_00420 (truB)
Enzymes [BR:
liz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LGH83_00420 (truB)
Transfer RNA biogenesis [BR:
liz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LGH83_00420 (truB)
Prokaryotic type
LGH83_00420 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UDL94787
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All DBs
Position
complement(91116..92075)
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AA seq
319 aa
AA seq
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MTLSAAMSDPILATPQVEPRPQRQKRGEVNGWLVLDKPIGMTSTHAVSRLKRIFNAKKAG
HAGTLDPLASGLLPVAFGEATKTVPFVQDGEKAYRFRVQWGSQTDTDDTEGRVIATSDTR
PTREAIEALLPSFTGVLMQRPPAYSAIKVNGERAYDRARDGETVELPPRPITVHALDLVM
FGDGEAVFEAKCGKGTYVRAIARDLGEALGCLGHVTALRRTRVGPLYESHAAQLADLEAE
GADLASFLMPVEAGLSDVPHVVINRDSAAQLRRGQSLLLLGRDAPSDGIAYATCGGVVVA
FGPVEQGALVPHRVFNLRF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttctgctgccatgtccgaccccatcctcgcgaccccgcaggtcgagccgcgc
ccgcagcgccaaaagcgcggtgaggtcaatggctggctcgtgctggataagccgatcggc
atgacgtcgacccacgcggtcagccgtctgaagcggatcttcaatgcgaagaaggcgggt
cacgccggaacgctcgacccattggcgtccggcctgcttccggtcgcgttcggcgaagcc
acaaagaccgtgccgttcgttcaagacggtgaaaaggcctatcgtttccgcgtgcaatgg
ggcagccagaccgacaccgacgataccgaaggccgcgtgatcgcgacgtcggacacgcgc
ccgacccgcgaggccatcgaggcgttgctgccgtcgttcactggggttctcatgcagcgc
cctccggcttattcggccatcaaggtcaatggcgagcgggcttacgaccgcgcgcgcgat
ggggagacggtcgaattgccgccacgccccatcacggttcatgcgctggatctcgtcatg
ttcggagacggcgaggccgtgttcgaagcgaaatgcggcaagggcacatatgtgcgtgcg
atcgcgcgtgatcttggcgaggcgctgggttgcctcggccatgtcacggcacttcgcagg
acccgcgtcggcccactttatgagtcccatgcggctcaactggcggatctcgaagccgaa
ggcgcggatctcgccagtttcttgatgccggtcgaggcgggcctcagcgacgtgccgcat
gtggtgatcaaccgggactcggcggctcagctccgtcgcggtcagagccttcttctgctc
ggccgggatgcaccgtcggatggcatcgcctatgcgacctgtggcggcgttgtcgtggcg
ttcggccctgtcgagcagggtgcgctggttccccatcgcgtgttcaaccttcgcttttaa
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