Lichenihabitans sp. PAMC28606: LGH83_00540
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Entry
LGH83_00540 CDS
T07621
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00470
D-Amino acid metabolism
liz00550
Peptidoglycan biosynthesis
liz01100
Metabolic pathways
liz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LGH83_00540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LGH83_00540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LGH83_00540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_00540
Enzymes [BR:
liz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LGH83_00540
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Precursor biosynthesis
Amino acid ligase
LGH83_00540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
UDL94809
LinkDB
All DBs
Position
complement(121433..122356)
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AA seq
307 aa
AA seq
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MTKHVAVLMGGWSAEREVSLRSGAACGAALESVGYRVTPIDIDRDIGATLAAMRPDVAFN
ALHGRVGEDGTIQGILEILRIPYTHSGVLASAIAMQKDKAKIMFTAAGVPVAHGMLVNRF
EAAREHVLPPPYVIKPVNEGSSVGVIIVHEGRSHPPQELGRPDWTFGDTLLAETFVAGRE
LTCAVMGDRALGVIDIVSNTGEFYDYDAKYAKGGSTHVFPANLKQNIYQHVQELALRAHR
ALGCRGVSRTDFRYDDRPEGTGELIALEVNTQPGMTETSLVPELAAHAGLSFGELVRWMV
EDASLDR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcatgtcgctgttctgatgggtggctggtcggccgagcgcgaggtgtcgctg
cgctccggggcggcctgcggcgccgcgctcgaaagcgtcggctaccgcgtgacccccatc
gacatcgaccgcgacatcggcgcgacgctggcggcgatgcgaccggatgtggccttcaac
gccttgcacggccgtgtcggcgaggatgggacgatccagggcattctggagattcttcgc
attccctatacgcattccggtgttttggcgtcggccatcgcgatgcagaaggacaaagcc
aagatcatgttcacggctgcgggggtgccggtcgcgcatggcatgttggtcaatcgattc
gaagcggcccgcgaacatgtcctgccaccgccctacgtgatcaaacccgttaacgaaggc
tcgtccgtcggggtcatcatcgttcatgagggacgaagccatccgccgcaggaactcggc
cgtccggattggactttcggcgacaccctgctggccgaaactttcgttgcgggacgggaa
cttacctgtgccgtgatgggtgatcgcgccctcggcgtgatcgacatcgtttccaacacc
ggcgagttctacgactacgatgccaaatatgccaaaggcgggtccacccacgtctttccg
gcaaatcttaaacaaaatatttaccaacatgtccaagagttggcgctcagggctcatcgg
gctctcggatgccgcggcgtgagtcgcaccgatttccgctacgacgaccgacccgagggc
acgggggagttgatcgcgctggaagtcaacacgcagcccgggatgaccgagacctccctg
gttcccgagcttgcagcacatgccggcttatcatttggtgagcttgtccgatggatggtg
gaggacgcctccttagatcgttaa
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