Lichenihabitans sp. PAMC28606: LGH83_00770
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Entry
LGH83_00770 CDS
T07621
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liz03400
]
LGH83_00770
DNA repair and recombination proteins [BR:
liz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LGH83_00770
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA_10
T2SSE
AAA_30
Zot
AAA_7
AAA_25
AAA_19
nSTAND_NTPase5
MeaB
CbiA
SRP54
AAA_28
IPT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UDL94849
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Position
168158..169732
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AA seq
524 aa
AA seq
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MSTDTWDMPGTILVGKSATFERLTLSLGNRHGLVTGATGTGKTVTLQKLAEGFSNAGVPV
IAADVKGDLAGIAMAGDGRAALTQRAAAIGIPYEPDRFPTVFWDVFGQQGHPIRATIAEM
GPLLVARLLELNAVQEGVLNVAFKVADEQGLLLLDLKDLRSMLQYISEHAAELTKSYGNV
APATIGTIQRQLLVLEAQGATSFLGEPALDIMDFIATDRDGRGIVNILAADKLVRSPRLY
ATFLLWFLSELFQQLPEVGDPEKPKLVFFFDEAHLLFDNAPKSLMDAIEQVVRLIRSKGV
GVYFVTQNPLDVPDTVLGQLSNRVQHALRAFTPRDQRAVKAAADTFRQNPAFDTASVITQ
LAVGEALVSMLQKDGTPEIVQRSLIAPPASRVGPITPAERQAIIDNGPITGKYDTAIDRD
SAFEMLKARAEGRAASVAPGSGQPSSPQANVPQAGAPQAASQGGGLLGEVGGALGRLWNS
GASSRGRLSTGQMVMRSALQSMARSVGTQVAREIIRGVLGGIQK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacacgtgggacatgccgggcacgatcctggtcggcaagagcgcgaccttc
gagcggctaaccttgtcgctcggcaaccggcacggactcgtgaccggggcaaccggcacc
ggcaagaccgtgacgctgcagaagctcgccgaaggattttccaatgccggggtccccgtg
atcgcggcggacgtgaaaggcgacctcgccgggatcgcgatggcgggagacgggcgtgcc
gccttgacgcagagagccgccgccatcggcatcccctacgagcccgatcggtttcccacc
gtgttctgggacgtattcggccagcagggccacccgatccgcgccacgatcgccgagatg
ggtccgctcttggtcgcgcgactgctcgagctgaatgccgtgcaggagggcgttctcaac
gtcgccttcaaggtcgcggacgaacagggcttgctgctgctcgacctgaaagacctgcgg
tcgatgctgcaatatatttccgaacatgcggccgaactgaccaagagctacggcaatgtg
gctcccgccacgatcggcacgatccagcggcagttgctggtgctcgaggcgcagggcgcc
acaagctttctcggcgagccggcgctcgatatcatggacttcatcgcgaccgatcgggat
gggcgcgggatcgtcaatatcctggcggccgacaagctggtgcgaagcccgcgcctctac
gcgacctttctgttgtggttcctgtcggagctcttccagcaattaccggaagtcggcgat
cccgaaaagccgaagctggtgttcttctttgatgaggcgcatctgctgttcgacaatgcg
ccgaagagcctgatggacgccatcgagcaggtggtgcggctgatccggtcgaagggggtc
ggtgtctattttgtcacccagaacccgctcgacgtccccgacaccgtcctcggccagttg
agcaaccgcgtccaacacgctttgcgggcgttcacgccgcgcgatcaacgggccgtgaag
gccgctgccgatacgtttcgacagaatccggctttcgataccgcatccgtcatcacccaa
ctcgcggtgggcgaggctctcgtctcgatgctgcagaaggatggaacgcccgaaatcgtg
cagcgatcgctgatcgcgccgcccgcctcgcgtgtcgggccgatcacgcccgccgagcgg
caggccatcatcgacaatggcccgatcacgggcaaatacgataccgcgatcgaccgcgac
agcgcctttgaaatgctgaaggcgcgcgccgagggcagggcggcttccgtcgctcccggg
tcaggtcagccttcatcgccgcaagcgaacgtgccgcaagccggcgctccgcaggcggcc
tcacaaggcggcgggctgctgggcgaggttggtggcgcgcttggacgcttgtggaatagt
ggagcgagcagtcgcggacgcctctcgaccgggcagatggtgatgcggtcggcgctgcaa
tcgatggcccgctcagtcggcacgcaggtcgcccgcgagatcatccgaggcgttcttggc
ggcattcaaaagtag
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