Lichenihabitans sp. PAMC28606: LGH83_01220
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Entry
LGH83_01220 CDS
T07621
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz01503
Cationic antimicrobial peptide (CAMP) resistance
liz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGH83_01220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LGH83_01220
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
liz01002
]
LGH83_01220
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
liz03110
]
LGH83_01220
Enzymes [BR:
liz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
LGH83_01220
Peptidases and inhibitors [BR:
liz01002
]
Serine peptidases
Family S1: chymotrypsin family
LGH83_01220
Chaperones and folding catalysts [BR:
liz03110
]
Other chaperones and cochaperones
DegP / HtrA
LGH83_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ
PDZ_6
Trypsin
PDZ_Tricorn
Peptidase_S46
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
UDL94926
LinkDB
All DBs
Position
257852..259423
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AA seq
523 aa
AA seq
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MTQPGQINPLQGSASTSASRAPRTRLRAALLGAVAVIAVGGVATETTLMSVAPVHAAQIA
PEAAPAQIAPGSFADVVDRVSPAVVSVKVKITEADDSDSDNSAGNNNQRAMPNIPKDDPL
YRFFKQFGEGQGMPHAHPRTGMAQGSGFFISKDGYVVTNNHVVENATDVQLTLNDGTVVP
ATVVGTDKKTDLALLKAKTGDNYPFVPWDDHTPRVGDWVIAVGNPFGLGGTVTAGIVSAR
GRDIGAGPYDDFLQIDAPVNRGNSGGPTFNTQGQVVGVNTAIFSPSGGSVGIGFAIPAEV
AKDVVASLKANGSVARGWLGIQIQPVNSDIADSLGLKDTKGALVAEPQKGSPASSAGIKS
GDVVTAVNGDMIDGPRELSRKIANMGPDKKVDLTIWRDGTNKVVPVTLGKLPADKEVKAE
VPAQDDKAEMTSLGLTLVPSSVVPGGSKEGVTIAEVDPDGIAAQKGLSVGDVILEAGGKA
VSKPSEITAAFSAAKKDGQKALLLRVKSGDSIRFLALATKSVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcccggccaaatcaatcctctgcagggatcggcgtcgacctctgcttcccgc
gccccccgcacccgtcttcgtgccgcccttctgggcgccgtcgcggtcatcgcggttggc
ggcgtcgcgaccgagaccaccttgatgagcgtcgcgcccgttcatgcggcgcaaatagcg
ccggaagccgcgcccgcacagatcgcgcccggctcgttcgccgatgtggtcgaccgggtc
agccccgcggtcgtgtccgtcaaggtcaagattaccgaggccgacgatagcgacagcgac
aatagcgcgggcaacaataaccagcgcgcgatgcccaacatcccgaaagacgacccgctg
taccgcttcttcaagcagttcggcgaggggcagggtatgccgcacgcgcatccgcgcacc
ggcatggcgcagggttcgggcttcttcatttcgaaggacggctatgtggtgaccaacaac
cacgtcgtcgaaaacgccaccgacgtgcaactcacgttgaacgacggcactgtcgtcccc
gcgacggtcgtcggcacagacaagaagaccgatctggctctgctcaaggcgaagaccggc
gacaactatcctttcgttccctgggatgaccacacgcctcgcgtcggcgattgggtgatc
gcggtcggtaatcccttcggccttggtggcacggtgacggccggtatcgtgtcggcgcgc
ggccgtgacattggtgccgggccctatgacgatttcttgcagattgacgcgccggtgaac
cgcggtaattcgggcggccccaccttcaacacgcagggtcaggtcgtgggcgtcaacacc
gcgatcttctcgccatcgggcgggagtgtcggcatcggcttcgcgatcccggccgaggtc
gccaaggatgtcgtcgcctcgttgaaggccaatggttcggtggcgcgcggttggctcggc
attcagattcagccggtcaattccgacatcgccgatagcctcggcctgaaggacaccaag
ggtgcgctcgtggccgagccgcagaagggttcgccggcatcgagcgccggaattaaatcg
ggtgatgtcgtgacggccgtgaatggcgacatgatcgacggaccgcgcgagttgtcgcgc
aagatcgccaatatgggacccgacaagaaggtcgatctcacgatctggcgcgatggtacc
aacaaggtggtccccgtcacgctcggcaagttgccggccgacaaggaggtcaaggccgag
gttccggcgcaggacgacaaggccgagatgacctcgctcgggctgaccttggtgccgtcg
tcggtggttcccggcggcagcaaggaaggcgtcacgatcgccgaagtcgatccggacggc
atcgcggcccagaagggtctcagtgtcggcgacgtgatcctcgaggctggcggcaaagcg
gtatcgaagccgtctgaaatcacggccgccttctcggctgcgaagaaagacggccagaag
gctctgctgctgcgcgtaaaaagcggtgattcgatccgcttcctggcgctggcaacgaag
tcggtcggctaa
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