Lichenihabitans sp. PAMC28606: LGH83_01470
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Entry
LGH83_01470 CDS
T07621
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGH83_01470 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
liz01007
]
LGH83_01470 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_01470 (hisS)
Enzymes [BR:
liz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
LGH83_01470 (hisS)
Amino acid related enzymes [BR:
liz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LGH83_01470 (hisS)
Transfer RNA biogenesis [BR:
liz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LGH83_01470 (hisS)
Prokaryotic type
LGH83_01470 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UDL94969
LinkDB
All DBs
Position
318787..320298
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AA seq
503 aa
AA seq
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MSTDAPANNETVKPRLPRGLIDRGPLDLAATDRMLSAIRENYALYGFEAVETPLIEYTDA
LGKFLPDLDRPNEGVFSFKDDDEAWLSLRYDLTAPLARYVAQNYDALPKPYRSFRVGQVF
RNEKPGPGRFRQFMQFDADTVGSASVAADAEMCVMAAVTLEKLGIPRGDYRVKVNNRKVL
DGVMEAAGLGAPDQAGRRLTVLRAIDKLDRLGPNGVRALLGSGRRDESGDFTKGAGLDEA
AIATILAFTEAGTDTNDATLVNLAEVVAGSARGQEGVAELREIAALVVAAGCGEDQVILD
PSVVRGLEYYTGPVFEADLTFTVQGEDGKPVRFGSVGGGGRYDGLVARFRNEPVPATGFS
IGVSRLFAALKAVGSPIVVGGPAAGPVVVLVLDKDQLPHYQGLVTRLREAGVRAELYLGQ
SGMNAQLKYADKRASVCAVIQGSNERQAEGGATVMIRDLVLGAELAKGSKDRDDYLDLRQ
KAQFPVLEADLVTAVQEVLARHA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgatgctccggccaacaacgagaccgtcaagccgcgcctgccgcgtgggttg
atcgaccgcggcccgcttgatcttgccgcgaccgatcggatgttgtcggccattcgtgag
aattacgcgctctacggtttcgaggcggtcgaaacaccgctgatcgaatataccgacgcg
ctcggcaagttcctgcccgatctcgatcggcccaacgagggggttttctcgttcaaggac
gacgacgaggcttggctgtctctgcgctatgatttgaccgcgccgctcgcccgctacgtg
gcccagaattatgacgcgctgccgaagccctatcgcagttttcgcgtcgggcaggtgttt
cggaacgagaagccgggtccgggtcgtttccgccaattcatgcaattcgacgccgatacg
gtcgggtccgcctctgtcgcggccgatgccgaaatgtgcgtcatggcggccgtgacatta
gagaagcttggcatcccgcgcggcgactatcgcgtcaaggtcaataatcgcaaggtcctc
gatggcgtcatggaggctgctggtctcggcgcgcccgatcaggccggacgacgactgacc
gtgctccgcgcgatcgacaagctcgatcggctgggtcccaacggggttcgggcgctgctc
gggtcggggcgccgcgacgagagcggcgactttaccaagggcgccggacttgatgaggcg
gcaatcgccacgatcctggcttttaccgaggctggaaccgacaccaacgacgcgacgctg
gtcaacctcgccgaggtcgtggctggctcagcgcgcgggcaggagggggtcgccgaactg
cgcgagatcgcggctctggtggtggctgccggctgcggcgaagatcaggtgatcctcgat
ccatcggtcgtgcgtgggctcgaatactatacaggtccggtcttcgaggccgatctcacc
ttcacggttcagggcgaggacgggaagcccgtccgcttcggatcggtcggcggcgggggg
cgctacgatggcttggtggcgcgttttcgcaacgaacccgttccggctaccggattttcc
attggtgtatcgcggttgttcgcggccctgaaggcggtcggtagcccgatcgttgtcggc
ggtcctgcggccggaccggtcgtggttctggtgctcgataaagatcagctgccgcattat
caaggtttggtgacgcggctgcgcgaggcgggcgtgcgggccgaactctacctcgggcag
tccggcatgaacgcgcagctgaaatatgccgataagcgcgccagcgtttgcgccgtcatt
cagggcagcaacgagcgtcaggccgagggcggggcgaccgtcatgatccgcgatctcgtt
cttggggcggaactcgccaagggcagcaaggatcgcgacgattatctcgacttgcgccaa
aaggcacaatttccagttttggaggccgatctcgtgacggctgttcaggaggttctcgcc
cgccacgcctag
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