Lichenihabitans sp. PAMC28606: LGH83_01815
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Entry
LGH83_01815 CDS
T07621
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
liz03009
]
LGH83_01815
Enzymes [BR:
liz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LGH83_01815
Ribosome biogenesis [BR:
liz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LGH83_01815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_15
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UDL95030
LinkDB
All DBs
Position
394807..396099
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AA seq
430 aa
AA seq
DB search
MNAAVTLDILRLGQRGEGVAQGLTNSIFVPDGLPGERLAAEVEGDRGRILEILRPSPDRI
APICPYYGTCGGCAIQSLAPAPYAEWKRGLVATALSMAHVDAAVGPTVMAHGAGRRRATF
HARAAKAVNVLIETPPAVGFMQARQHDIVAIAFCPILSPDMADALDTSRSIATALASTGK
PLDILVTATQSGLDIDLRGCGPLDDATTARLIAVGAAHRCARISNHGEVVIESRAPLLTM
GQASVYPPPGSFLQATQLGEDVLAAQVLAGVGAARRVLDLFSGIGTFALRLAERATVHAV
DLEAKPLAALARAARHSPSLRPVTIETRDLFRRPLTSVDLAAYDAVVFDPPRAGAAAQAE
QIAASAVPTVVAVSCSPASFARDAAILIAGGYQLGPVVPVDQFIYSAHIELVAAFRKPTV
SAKKRRSLLS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgtcacgctcgatatcctgcggctcggccaacgcggcgagggtgtcgct
caaggtttgaccaactccatcttcgtgccggatgggctacccggcgagcgcctcgcagcc
gaggtcgagggcgaccggggacgtatcctggagatcctccggcccagccccgatcgtatc
gcgccgatctgcccctattacgggacgtgcggcggctgtgcgatccagtcgctcgccccg
gcaccctatgcggaatggaagcgtggtctcgtcgcaacggccctgtcgatggcgcatgtc
gatgcggccgtcgggccgaccgtcatggcccatggggcaggccgccgccgtgcgacgttc
cacgctcgtgccgccaaggccgtcaacgtcctcatcgagacaccgccggcggtcggcttc
atgcaggcgcgccagcacgacatcgtggccatcgcattttgccccattctttcgcccgac
atggcggatgcactcgatacatcccgctcgatcgcaaccgctctcgcctcgaccggcaag
ccgctcgacattctcgtcactgcgacgcaatccgggctcgatatcgatctgcgcggctgt
gggccgctcgacgatgcgaccacggcgcggctcatcgcggttggcgcggcgcatcgttgc
gctcgcatctcgaaccacggcgaggtcgtgatcgaaagccgcgcgcctctcctgacgatg
ggacaggcttcggtctatccaccgcccggctcattccttcaagccacccagttgggcgag
gatgtgcttgcggcgcaggttctggcaggtgttggtgctgcgcggcgcgtgctcgatctc
ttcagcggcatcggtacattcgcgctccgtctcgccgagcgcgccaccgtccatgcggtg
gatctcgaggccaagccgcttgcggccttggccagggccgcgcgtcattcgccgtcgctc
cggcccgtcaccatcgagacgcgcgatctgtttcgccggccgctcacgtcggtagacctc
gcggcttacgatgcggtggtgttcgatccgccacgcgcgggtgcggcagcgcaagccgag
cagattgcggcttcggcggtaccgaccgtcgtggccgtgtcgtgcagtccggcgagcttc
gcgcgcgacgccgcgattctgatcgccggtggatatcagctcggcccggtcgtgccggtc
gatcaattcatctattcggcccatatcgagcttgtggctgcgttccggaaaccaaccgtg
agcgcgaagaaacgccggtcgctgctgtcctga
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