Lichenihabitans sp. PAMC28606: LGH83_01980
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Entry
LGH83_01980 CDS
T07621
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
liz03110
]
LGH83_01980 (clpA)
Chaperones and folding catalysts [BR:
liz03110
]
Heat shock proteins
HSP100
LGH83_01980 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
nSTAND3
RuvB_N
AAA_7
AAA_14
AAA_18
IstB_IS21
ResIII
AAA_3
TniB
NACHT
TIP49
AAA_6
ArgZ-like_C_2nd
IPT
Motif
Other DBs
NCBI-ProteinID:
UDL95055
LinkDB
All DBs
Position
426500..428980
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AA seq
826 aa
AA seq
DB search
MPAFSRALEQSLHRALAVANERHHEYATLEHLLLALIDDTDAAAVLRACSVDIDILKKQL
VEYIDNELENLVAEGHDDAKPTAGFQRVIQRAHIHVQSSGREEVTGANVLVAIFAERESH
AAYFLQEQDMTRYDAVNYISHGIAKRPGLSDPSKSPRGADEEGDGRDKDAKEPDSKKKEG
ALEAYCVNLNKKARDGRIDPLIGREMEVQRTIQVLCRRQKNNPLLVGDPGVGKTAIAEGL
ARKIIKNEVPEVLAGATVFALDMGTLLAGTRYRGDFEERLKQVMKEIEGHKNAILFIDEI
HTVIGAGATSGGAMDASNLLKPALAQGGLRCIGSTTYKEYRQYFEKDRALVRRFQKIDVN
EPSVPDAVEILKGLKPYFEEFHKVRFTNEAVRAAVELSARYIHDRKLPDKAIDVIDESGA
SQMLVPEAKRKKTIGIKEIESTIATMARIPPKTVSKDDAEVLAHLDATLKAVVYGQDEAI
ASLTSAIKLARAGLRDGEKPIGSYLFSGPTGVGKTEAARQLALGLGVELIRFDMSEYMER
HTVSRLIGAPPGYVGFDQGGLLTDGIDQHPHCVLLLDEIEKAHPDLYNILLQIMDHGKLT
DHSGKQIDFRNVILIMTTNAGASDQARAMIGFTRAKRTGEDIEAINRLFTPEFRNRLDAI
VPFGHLPASVIAKVVDKFILQLEAQLADRNVTIELTDEARNWLIENGYDEAMGARPMARV
IQQSIKTPLADEVLFGKLKNGGAVRVVVTAEEGGPKKLGFVYPDGPVMPRPERDIVEAGR
KRKSRAEAEDARDEEEPETFDTEEDGDGETPPSAGGGSVPKVPLKT
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcattctcacgtgctctagaacaatcgcttcatcgtgccttggcggtcgccaat
gaacgccaccatgaatatgcgacgctcgaacatctgctgcttgcgctgatcgacgatacc
gatgcggcggcggtgttgcgcgcttgctcggtcgacatcgacattctgaagaagcaactc
gtcgaatatatcgacaacgaactcgaaaaccttgtggccgagggacatgacgacgccaag
ccgacggccggcttccagcgcgtcatccagcgcgcccacattcatgttcaatcgtcgggc
cgcgaagaagtgaccggcgccaacgtgttggtcgcgatcttcgccgagcgcgagagccac
gccgcctatttcctgcaggagcaggacatgacccgctacgacgcggtcaattacatcagc
catggcattgccaagcgtcccggcttgtcggatccgtcgaagtcgccgcgcggcgccgac
gaggagggcgatggacgcgacaaggacgcgaaggagccggattccaagaagaaggaaggc
gctctcgaggcctattgcgtcaatctgaacaagaaagcgcgtgacggccgcatcgatccg
ctgatcggccgcgagatggaagtgcagcgcaccattcaggttctctgccgtcgacagaag
aataatccgcttttggtcggtgatccgggcgttgggaaaaccgcgattgcggaaggtctc
gcgcgcaagatcatcaagaacgaggtgccggaggttctggctggcgcgaccgtctttgcg
ctcgacatgggtacgctactggctgggacgcgttatcggggggacttcgaagagcgtctg
aagcaggtcatgaaggagatcgagggtcacaagaacgcgatcctcttcatcgacgaaatc
catacggtcatcggcgcgggcgcgacctcgggcggcgccatggatgcgtcgaacctgttg
aagccggcgcttgcccagggtggtctgcgttgcatcggctcgaccacctacaaggaatat
cgtcagtatttcgagaaagatcgcgcgctggttcgtcgcttccaaaagatcgacgtcaac
gagccgtcggtgccggatgcggtcgagatcttgaagggcctcaagccctatttcgaggaa
ttccacaaggtccgcttcaccaatgaggcggttcgggcggcggtcgagctctcggcccgc
tacatccatgaccgtaagctccccgataaggcgatcgatgtgatcgacgagtcgggcgcg
tcgcagatgcttgtgcccgaagccaagcggaagaagaccatcggcatcaaggagatcgaa
agcacgatcgcgacgatggcgcgtatcccgcccaagaccgtgtcgaaggatgacgccgag
gtgttggcgcatctcgatgccaccctgaaggcggtcgtctatgggcaggatgaggccatt
gcgtcgctgacctccgccatcaagctggctcgcgccggcttgcgcgacggagagaagccg
attggctcctacctgttctccggcccgacgggggtcgggaaaacggaggctgcgcgccaa
ctggcgctcggcctcggcgtggaactgatccgcttcgacatgtcggaatatatggagcgg
cacaccgtcagccgactgatcggcgcacctcccggctatgtcggtttcgaccaaggtggg
ttgttgaccgatgggatcgatcagcatccgcattgcgtgctgctgcttgacgagatcgag
aaggctcaccctgatctctacaacattttgttgcagatcatggaccatggaaagctgacg
gatcatagcggcaagcagatcgatttccgcaacgtcatcctgatcatgaccacgaatgct
ggtgcgtcggatcaggcacgcgcgatgatcggtttcacgcgcgccaagcggaccggagag
gatatcgaggcgatcaatcggttgttcaccccggaattcagaaaccgcttggatgcgatt
gttccgtttggtcatttgccggcatccgtcatcgccaaggtggtcgacaagttcatcctg
cagctcgaagcacaactcgccgatcgcaacgtcacgatcgaactgaccgacgaggcgcgc
aactggttgatcgagaacggctacgacgaagcgatgggtgcgcggccgatggctcgcgtc
atccagcagtcgatcaagacgccgctggccgatgaagtgttgttcggcaagctcaagaac
ggcggtgctgttcgtgtcgtcgtcacggcggaggaaggcgggccgaagaagctcggcttc
gtctacccggacgggccggtcatgccgcgtcccgagcgcgatatcgtcgaggcgggacgg
aagcgaaagagccgtgccgaagccgaagatgcgcgcgacgaggaggagccggagaccttc
gatacggaggaggatggtgatggcgagacgccgccatccgcaggcggtgggtcggttccc
aaagttccgctcaagacctga
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