Lichenihabitans sp. PAMC28606: LGH83_02960
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Entry
LGH83_02960 CDS
T07621
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGH83_02960 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
liz01007
]
LGH83_02960 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_02960 (aspS)
03029 Mitochondrial biogenesis [BR:
liz03029
]
LGH83_02960 (aspS)
Enzymes [BR:
liz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LGH83_02960 (aspS)
Amino acid related enzymes [BR:
liz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LGH83_02960 (aspS)
Transfer RNA biogenesis [BR:
liz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LGH83_02960 (aspS)
Prokaryotic type
Other AARSs
LGH83_02960 (aspS)
Mitochondrial biogenesis [BR:
liz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LGH83_02960 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
DUF7765
Motif
Other DBs
NCBI-ProteinID:
UDL96538
LinkDB
All DBs
Position
complement(623571..625364)
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AA seq
597 aa
AA seq
DB search
MHRYRSHTCGALTAADAGTEVRLSGWCNRIRDHGGVLFIDLRDHYGLTQCVIDPESPAFK
DAEVLRSEWVVRVDGSVRLRPAGTQNADMPTGAIEIYVTGIEVLGPSAELPLPVATEQEY
PEETRLKYRFLDLRRERLHKNIMLRGNVIDSLRSRMKRQGFFEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE
MSFVTQEDVFEAVEPVLRGVFEEFGGGRPVTQKFPMIPYRESMLKYGVDKPDLRNPLVIV
DVTEEFNHPDVSFKAFKNVIAAGGVVRAIPATGAGAQPRSFFNKLNDWARGEGAPGLGYI
IFEQDGDKLTGKGPIAKFIPAEVQATIAEKANLKAGDAVFFACDQEGKAARLAGQARIRI
GNDLDLLKKDVFELCWIVDFPMYEYNEDDKKIDFSHNPFSMPQGGLEALRTKDPLDILAY
QYDIVCNGVELSSGAIRNHQPEVMREAFGIAGYDEAVLEERFGGMYRAFQYGAPPHGGIA
PGVDRIVMLLAGEENLREIVLFPMNQRAEDLLMGAPSVASTKQLRELHIRLNLPEPK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttaccgatcccatacctgtggcgcactcacggcggccgatgccggcacggag
gtgcgtctctccgggtggtgcaatcgcatccgcgaccacggcggcgtgcttttcatcgat
ttgcgcgaccattatggcctcacccaatgcgtcatcgatccggaatcgccggccttcaag
gacgcggaagtgctgcggtcggaatgggtggtgcgggtcgacggctcggtgcggctgcgt
ccagccggaacccagaatgccgacatgccgacgggcgcgatcgagatctacgtcactggc
atcgaggtgctcggcccctcggccgaattgccgctgccggtcgcgactgagcaggaatat
cctgaagagacgcggttgaagtaccgctttctcgacctgcgccgcgagcggctgcacaag
aacatcatgctgcgcggcaatgtgatcgatagcctgcgctcgcgcatgaagcgtcagggc
ttctttgaattccagaccccgatcctgaccgcgtcgtcacccgagggcgcacgcgactat
ctggtgccctcgcgcgtccatccgggcaaattctacgcgctgccgcaagcgccacagcag
ttcaagcagctcatcatggtggcgggcttcgaccgctacttccagatcgcgccgtgcttc
cgcgacgaggatgcgcgcgccgaccgcagcccgggcgagttctaccaactcgatatcgaa
atgagtttcgtaacccaggaggacgtgttcgaggcggtcgagcccgtgctgcgcggcgtc
ttcgaggaattcggcgggggccgtccggtcacccagaagttcccgatgatcccctaccgc
gagtcgatgctgaaatatggcgtcgacaagccggaccttcgcaacccgctcgtcatcgtg
gacgtgacggaggagttcaaccatcccgacgtgtcgttcaaggcgttcaagaacgtcatc
gcggccggcggcgtggtgcgcgcgattcccgccaccggggcaggggcgcaaccacgctcc
ttcttcaacaagctgaatgattgggcgcgcggcgaaggcgccccaggcctcggctacatc
atcttcgaacaggacggcgacaagctgaccggcaaggggccgatcgccaaattcatcccg
gcggaggtccaagccacgatcgctgagaaagcgaatttaaaggccggtgacgcggtcttc
ttcgcctgcgatcaggaaggcaaggcggctcggctcgcagggcaggctcgtatccggatc
ggcaacgatctcgatcttctcaaaaaggacgtgttcgagctctgctggatcgtcgatttt
ccgatgtacgagtataacgaagacgacaagaagatcgacttttcgcacaacccgttctcg
atgccgcagggcgggctcgaggctctccgcaccaaggatccgctcgacatcctggcctat
caatatgacatcgtctgcaacggcgtcgaattgtcgtccggcgcgatccgtaaccaccag
ccggaggtgatgcgcgaggcattcggcatcgcgggttacgacgaggccgttctcgaagag
cggttcggcggcatgtatcgcgctttccaatatggcgcgccgccgcatggcgggatcgcg
cctggcgtcgatcgcatcgtcatgctgctggccggcgaggagaacctgcgcgagatcgtg
ctgttcccgatgaaccagcgtgccgaggatctgctgatgggcgccccatcggtcgcgagc
acgaagcagttgcgcgaattgcacatccgcctgaacctgcccgaacccaagtaa
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