Lichenihabitans sp. PAMC28606: LGH83_02975
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Entry
LGH83_02975 CDS
T07621
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00190
Oxidative phosphorylation
liz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LGH83_02975
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGH83_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liz03019
]
LGH83_02975
Enzymes [BR:
liz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LGH83_02975
Messenger RNA biogenesis [BR:
liz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGH83_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UDL95214
LinkDB
All DBs
Position
complement(628293..630476)
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AA seq
727 aa
AA seq
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MDSELKADEATIASAGIDLASSPKRFINREISWLQFNRRVLEESSNPNHPLLERLRFLSI
SANNLDEFFMVRVAGLHGQVNSGVRTVSQDGLTPSEQLASISAAVADLGNEQQRLWLDLR
VELQANGIVIVEPQDLDPQERTWLENHFQSHVFPILTPLAIDPAHPFPFIPNLGFTLALD
LDRKADGRRLHALIRMPSKIDRFIRLPDQFSPGVVRVVTLENLIAMNTSRLFPGYSVYGQ
GVFRVIRDSDLEVEEEAEDLVLLFESALKRRRRGSVIRLELDSNMPEGLRLLVGEELDVS
SDLAFTVDGMIALNELSELVSIERPDLKFPPYNVRFPERVRDNGGDCFAAIRVKDLVVHH
PYESFDVVVQFLTQAARDPNVVAIKQTLYRTSKDSPIVRALIEAAEAGKSVTALVELKAR
FDEEANIRWARDLERAGAQVVFGFIELKTHGKLSMVVRREGGSLATYCHVGTGNYHPQTA
RIYTDISFFTADPAIGRDVLRIFNFITGYADPVGLEQMSVSPFTLKQKLLDHIAAEAAFA
QAGKPANIWLKCNSLVDPDIIDALYAASGAGVRIDLVVRGICCLRPGVPGLSDNIRAKSI
VGRFLEHSRVYAFGGGYGLPHSKANVYISSADLMPRNLERRVEVLLPINNPTVHDQILNQ
IMIANLIDNQQSFRVLPDGSSQRIVSGPDEEPFNAHNYFMTNPSLSGRGKSLKESSPKIL
LKRLNKR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaactgaaggccgatgaagcgaccatcgcgagcgccggcattgatctcgca
agctcacccaagcggttcatcaaccgggaaatttcctggcttcagttcaatcgtcgcgtg
ttggaggaatcatccaaccccaaccatccgctgctcgaacggcttcgctttctgtcgatc
tcggccaataatctcgatgaatttttcatggtgcgggttgccggtttacacggacaggtc
aactccggcgttcgaactgtatcccaagatggcctgaccccatccgagcaactggccagc
atctcggccgccgtcgcggatctcggcaacgagcagcagcggctgtggctcgatctccgc
gtcgagttgcaggccaacgggatcgtgatcgtcgagcctcaggatctcgacccgcaggag
cggacctggctcgaaaaccacttccagtcgcacgtgttcccgattctcacgccgctcgcg
atcgatccggcgcatccctttccgttcattccgaatctgggcttcacgctcgcgctcgac
ctagaccgcaaggcggacggacgacggcttcatgcgctgatccgtatgccgagcaaaatc
gatcgcttcatccggctccccgaccaattctcgcccggcgtcgtgcgggtggtcacgctc
gagaacctcatcgcgatgaacacgtcgcggctattccccggctattcggtttacgggcag
ggcgtgtttcgtgtgatccgcgacagcgatctcgaggtcgaggaagaggccgaagatctg
gttttgctgttcgaatcggctctgaagcgccgtcggcgcgggtctgtgatccgccttgag
ctcgattccaacatgccggagggtctgcggctcctggtcggggaagaactcgacgtctcg
tccgatctcgccttcacggtcgacggcatgatcgcgctgaacgagttgtcggagctcgtc
tcgatcgagcggcccgatctcaaattcccgccctataacgttcgcttcccagagcgggtg
cgcgacaatggcggtgattgctttgcggcgatccgggtcaaagacctcgtggtgcaccac
ccctatgagtcattcgacgtggtggtgcagttcctgacccaggcggcacgcgacccgaac
gtcgtcgcgatcaagcagacgctctaccgcacctcgaaagacagcccgatcgtccgcgcg
ctgatcgaggccgccgaagctggcaagtcggtcacggccttggtcgaattgaaagcgcgt
ttcgacgaagaagccaacattcgctgggcgcgtgatctcgagcgggccggcgcccaggtg
gtgttcggctttatcgaactgaaaacccacggcaaactttccatggtggttcgacgcgag
ggcggcagcctcgcgacctattgccatgtgggaaccggcaattatcacccgcaaacggca
cgcatctataccgacatctcgttctttacagccgatcccgcgatcgggcgggatgtgttg
cggattttcaacttcatcactggctatgccgatcccgtcgggctcgagcagatgtcagtc
tcgccgttcaccttgaaacagaagctgctggaccacatcgctgcggaagcggccttcgcg
caagccggcaagccggccaacatttggctgaagtgcaactcgctcgtcgacccggacatc
atcgatgcgctttacgccgccagcggggcaggcgtgcggatcgatctcgtcgtgcgaggc
atctgctgcctgcgtccgggtgtgccggggctatccgacaacatccgcgcgaaatccatt
gtcggccgctttctggagcattcccgcgtctacgcgttcggtggcggctacgggctgccg
cactcgaaagccaacgtctacatctcctcggccgatctcatgccccgtaatctcgagcga
cgcgtcgaggtcctgttgccgatcaacaatccgaccgtgcacgaccagatcctgaaccag
atcatgatcgccaacctgatcgataatcagcagagttttcgagttcttccggatgggagc
agccagagaatcgtctccggtccagacgaggagccgttcaatgcccacaattatttcatg
acgaacccaagcctgtccggacgcggcaagtcgctgaaagaatccagccccaaaatcctg
ctcaagcgtctcaacaagcgatga
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