Lichenihabitans sp. PAMC28606: LGH83_03135
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Entry
LGH83_03135 CDS
T07621
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00260
Glycine, serine and threonine metabolism
liz00460
Cyanoamino acid metabolism
liz00630
Glyoxylate and dicarboxylate metabolism
liz00670
One carbon pool by folate
liz00680
Methane metabolism
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01120
Microbial metabolism in diverse environments
liz01200
Carbon metabolism
liz01230
Biosynthesis of amino acids
liz01240
Biosynthesis of cofactors
liz04981
Folate transport and metabolism
Module
liz_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LGH83_03135
09102 Energy metabolism
00680 Methane metabolism
LGH83_03135
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LGH83_03135
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LGH83_03135
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LGH83_03135
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LGH83_03135
Enzymes [BR:
liz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LGH83_03135
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UDL96542
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Position
complement(661905..663215)
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AA seq
436 aa
AA seq
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MTPTAASRRGGARGSNTFFGAGLAAVDPEIARAIDLELGRQRDEIELIASENIVSRAVLE
AQGSVMTNKYAEGYPGRRYYGGCQFVDIAEQLAIDRAKELFGCGFANVQPNSGSQANQAV
FLALLQPGDTFMGLDLAAGGHLTHGSPVNMSGRWFKPESYTVDRETQLVDMDEVERQAKA
VRPKLIIAGGSAYSRFWDFARFRAIADEVGAMFLVDMAHFAGLVAGGVHPSPFPHAHVVT
STTHKTLRGPRGGLILTNDADLAKRMNSAIFPGLQGGPLMHVIAGKAVAFGEALTPEFKI
YAQQVVDNAKALADSVVAGGLAVVSGQTDNHLMLVDLRPKRLTGKAAEAALGRAHITVNK
NGIPFDPEKPMITSGIRIGTPAATSRGFGTAEFTIVGSLIGETLDGLAAHGEDGNAAVEA
NVRQQVEALTRRFPIY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaccgccgcctcccgccgtggtggagcacgtggttcgaacacattcttcggc
gccggtcttgctgcggtcgatccggagatcgctcgtgcgatcgacctcgaactcggccgt
caacgcgacgagatcgagttgatcgcctcggaaaatatcgtatcgcgcgccgtgctcgag
gctcagggctcggtcatgaccaacaaatatgccgagggctatccgggccgtcgctattat
ggtggttgccaattcgtcgacattgccgagcaactcgcgatcgatcgcgccaaagaattg
ttcggctgcggtttcgccaatgtccaaccaaactccggcagtcaggccaatcaggccgtt
tttcttgcgctcttacagcccggtgacacgttcatggggcttgatctcgcggctggtggc
cacctgacgcacggatcgcccgtcaatatgtcgggccgctggttcaagcccgagtcctat
acggtcgatcgcgagacgcagctcgtcgatatggatgaggtcgaacgccaagccaaagcc
gttcggccgaagctgatcatcgcgggtggatcggcttattcgcgtttctgggatttcgcc
cgcttccgcgcgatcgccgacgaggtcggggcgatgttcctggtcgacatggcgcatttc
gctgggctcgtggccggtggcgtgcatccctcgccgttcccgcatgcccatgtcgtgaca
tcgacgacccacaagaccttgcgtggtccgcgtggcggcctgattctcaccaatgacgcc
gacctcgccaagaggatgaattcggcgatcttccccggtttgcagggcggcccactgatg
catgtcattgccggtaaggctgtggcattcggcgaagcgctgacgccggagtttaagatc
tacgctcagcaggttgtcgacaatgctaaggccttggccgatagcgttgttgcggggggg
cttgcggtggtgtccggccagaccgacaatcatctgatgctggttgacctccggccgaag
cgactgaccggcaaggccgcggaggcagcccttggtcgcgcccatatcacggtgaataag
aacggcattccgttcgaccctgaaaagccgatgatcacctctgggatccgtatcggtacg
cctgccgccacatcgcgcgggttcggaacggcggaattcacgatcgtcgggtcgctgatc
ggcgagacgctggatggtctggccgcccatggcgaagacggaaacgcggccgtcgaagcc
aatgtgcgccagcaggtcgaagccctgacgcggcgctttccaatctactga
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