Lichenihabitans sp. PAMC28606: LGH83_03140
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Entry
LGH83_03140 CDS
T07621
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
liz01002
]
LGH83_03140
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_03140
Peptidases and inhibitors [BR:
liz01002
]
Cysteine peptidases
Family C82
LGH83_03140
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LGH83_03140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UDL96543
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Position
complement(663384..664610)
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AA seq
408 aa
AA seq
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MIGPAAHADDVALGSQAEWAQKYDSDPKLEIQRSTTPVLSPQTVAATEQAIQTYQGIVSK
GGWGNVAGGASLRVGSKSQAVVALRRRLMASGDLDAAAGMSPVYDAYVEAGVKRFQARHG
IGESGAVSSETVAALNVPAETRLRQLETNLVRLRSFSGNLGPRFVMANIPAAMVETVENG
VVFSHHIAGVGKIDRQSPVMQTKATDINFNPFWTVPASIIRKDLIPKMQADANYLTDNHI
RIFNKENQEVPSSSINWNSLDAVNYKFREDPGENNSLGVVRINIANPYGVYMHDTSTKGV
FGDDFRFVSSGCIRLQNVRDYVAWLLKDTPGWDRDHIDAAIRTGDRIDVKLASPVAVYWV
YITAWATPDGVVQFRPDIYQRDGFGTVTASNVTSDEQNASVEPAIQQE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaccggcggcccatgccgacgatgtcgcgctcggatcgcaagccgaatgggca
cagaagtacgattccgatccgaagctcgaaatccagcgctcgacgaccccggtcctgtcg
ccacagacggttgcggcaaccgagcaggcgatccagacctaccaaggcatcgtttccaag
ggcggttggggcaatgtcgcgggcggcgcgagcttgcgggtaggatccaagagccaggcg
gtcgtcgcgcttcgccgacgtttaatggcttcgggtgatctcgatgcggcagccggcatg
tcacctgtctacgatgcttatgtcgaagccggcgtgaagcggtttcaggcgcgccacggg
atcggcgaatcgggtgcggtgtcgtcggagacggttgcggccctcaacgtgccggccgaa
acgcggcttcgtcagctcgaaaccaacctcgtgcggctgcgctccttctcgggcaacctc
ggcccgcggttcgtgatggcgaatattccggccgcgatggtcgagacggtcgagaacggc
gtcgtgttcagccaccacattgccggcgtcggcaagatcgatcgccagtccccggttatg
cagaccaaggcgacggacattaatttcaacccattctggacggtgccggcctcgatcatc
cgcaaggatttgatccccaagatgcaggccgatgccaattacctgaccgacaaccacatc
cgaattttcaacaaggaaaaccaggaggttccatcctcgtcgatcaactggaactccttg
gatgccgtcaattataaattccgtgaggatccgggcgagaataactcgctcggtgtggtg
cgcatcaacatcgccaatccgtatggcgtctacatgcacgacacctcgaccaagggtgtc
ttcggtgacgatttccgcttcgtctcgtcaggctgcattcgcctgcagaacgtgcgtgac
tatgtggcatggctcctgaaggacacgcccggctgggatcgcgatcatatcgatgcggcg
atccgcacgggtgatcggatcgacgtcaagctggcgtcgccagttgcggtctattgggtc
tacatcaccgcttgggccacgcccgacggggtggtgcagttccggcccgacatctaccag
cgcgatggatttggcactgtgacggcctccaacgtgacgtccgacgagcagaacgcatcg
gtcgaaccggctattcaacaggaataa
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