Lichenihabitans sp. PAMC28606: LGH83_03250
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Entry
LGH83_03250 CDS
T07621
Name
(GenBank) autotransporter domain-containing protein
Organism
liz
Lichenihabitans sp. PAMC28606
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
UDL95258
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Position
686352..689714
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AA seq
1120 aa
AA seq
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MSTALVSIGVADRCAIAQTLDLAGQDVTLPRGTSFNRQGFLNGSDAVTNDGGSAATLTEG
GGANGTTYSGAVSDGTAQASLVHSGGAVTLTGLNSYSGTTTVQAGNVQLGTATAETSLAG
RINLLPSAAVAVVNADLGRVTETINDGGTVTFSGTANAAPSTLTNSYNAASGLGLVQFTE
ASSAAGATLVNNAGATIALSGSSRLGSAATTGDYTTTLNNNGTVIFVDGSSAGHARLVDN
ASGVTTFAGQANAATASVDNNGVLSFTGQSSAAAATVVNNGSLRFSDTSTAGSAQIANNA
TASFDSAASAGSATLTTNGTGRLTFSGTSTAGTAQVIDNGATVFAGSSTAAAASITTNAT
GTLTFQDTAHAGTSTITNNGDLQFAGQASGDSATVVSNLGSRVDLFGLTNGGTTLGSLDG
AGAVSLGGNVLAVGSNDRSTTLLGSVTDGGAGGGLTKLGSGTLVLGGQNTYTGETVVDGG
TLKAAASGAFASGSAFTVASGATLDLGGTNQTTASISGSGTIGNSGAPNAVLTTGANNAS
TIYSGVIQQVGLNKVGDGTLTLSGDNTYAGATVVSGGTLLVSGSIANSTVTLQNGGMLAG
SGLLGALVVQAGSVLAPGATTPFTTLKISGNVTFDQGSIYRINVDPTGRTDSIAATGSAT
LNGGTVDIVAGGRFATSQRYTILTAEGGVTGAFSSLTATSNLAFLAPTLSYDATSVSLGL
TRNEVDFVSLAQSANQRATARALQSLDLDDALYNAVLNQSAAGARQAFDATSGEIHASAV
TAAFEDAAQVVHSVTNRLDDADRATSGTALQSLNQFAPPPALLPGSAQGYAPPAQTVPVP
ASLPYSLWGSGFGDFGHNGRNSNAAALDRALGGFVLGGDVRIDGSALNNWRIGLVGGYTN
DQIDVKARGASGSVETFFGGVYGGAHYGAVDIKLGVTGGGLQTTTQSNVAFPGFIDRTDA
TYGGSMVQGFGEIGYKIALGYGTIEPVLQGAAIHIDQDGFTERGGAAALSGFTRGYDVET
TTLGLRGESAIFTTLPLSARGFVGWRHAFGDVTPSAVLAFSAGSNAFAISGSPVDRDAVV
AEVGLDYHAAANLVIGVSYAGQAGQRAYDNAISARLAYRF
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggccttggtctcgatcggcgtcgccgatcgatgcgcaatagcgcagacgctc
gatctcgcgggtcaggatgtgacgttgccgcgcggcacatcattcaaccgacagggcttt
ctcaacggaagcgacgcggtcaccaacgatggcggatcggccgcgaccctgaccgagggt
ggcggagccaacggaaccacctattctggagctgtttccgatggcaccgcgcaggcgtcg
ctcgtccatagcggtggcgcggttacgctgaccggcctgaattcatattccggcaccacg
acggttcaagccggcaacgtccaactcggcaccgccacggccgagacgtcgttggcggga
cgcatcaacctgctcccatccgccgccgtggcggtcgtcaatgccgatctcggacgagtg
accgaaaccatcaacgacggcggcaccgtcacgttctcggggaccgcgaacgctgcacct
tcgacgctgaccaacagctacaatgctgcctcgggtcttgggctcgtgcagttcacggaa
gcaagttcggcggctggcgcgacactggtcaacaatgccggagccacgatcgccctgtcg
ggcagcagccgcctcggatcggcggccacaacgggtgattacacgacgacgctgaacaac
aatggcacggtcatattcgtggacggcagctccgcgggacatgcgcggctggtcgacaat
gcttccggtgtcacgacatttgccgggcaagcgaatgccgcgacggcctcggtcgacaac
aatggcgttctgtcgttcaccggacagagcagtgccgccgcagcgactgtagtcaacaac
ggatccttgcgtttcagtgataccagcacggctggctccgcccagatcgccaataatgcc
acggcgagcttcgacagcgccgcgagtgccgggtcggccaccctgacgaccaatggaacg
gggcgcttgacgttctcgggcaccagcacggccggcaccgcgcaggtgatcgacaatggc
gcgaccgtgttcgccgggtcgagcacggccgccgccgcctcgatcaccaccaatgcgacc
ggcacgctgacgttccaggacaccgcccatgcgggtacctcgaccatcaccaacaatggc
gacttgcagtttgcgggacaagcatcaggcgacagcgccacggtcgtcagtaatctcggc
agccgagtcgatctcttcggtctgacgaatggcggcaccacactcgggtctctcgatggc
gccggtgccgtgtcgctgggcggcaacgttctggcggtcggcagcaacgatcgatcgacc
actttgctcggctccgtgacggatggtggagcgggcggcggtttgaccaagctcggcagt
gggactctcgttctgggtgggcagaacacctatacgggagagacggtggtggatggcggc
acactgaaggccgcggcctccggcgcgttcgcgtcagggtcagccttcacggtcgcgagc
ggtgcgacgctcgacctcggcggtaccaatcagaccacggcgtcgatctcgggtagcggc
accatcggcaatagcggcgctccgaacgcggtgctgacgaccggtgccaataatgcgtcg
acgatctattccggggtaattcagcaggtcggtctgaacaaggtcggcgacggcacgctg
acgctgagcggcgacaacacctatgcgggtgccacggtggtgagcggcgggaccttgttg
gtgagcggatcgatcgccaattcgaccgtcacgctgcagaacggcggtatgctggctgga
agcggcctgcttggagcactcgtggtgcaggctggctcggtgctggcgcccggcgccacc
acacccttcacaaccctgaagatttccggcaacgtcaccttcgaccaaggctccatctac
cggatcaacgtcgatcccaccggacgaaccgactcgattgcggcaactggcagcgccacc
ctcaacggcggcacggtcgatatcgtggcgggcggtcgtttcgcgacatcgcagcgctat
acgattctcactgcagagggtggagtgacgggcgccttctcgtccctgaccgcaacctcg
aacctcgcctttctggcacccacgctcagctatgacgcgaccagcgtgtcgctcgggctc
acgcgcaacgaggtcgatttcgtcagtctggcgcagagcgcaaaccagcgcgcgaccgcg
cgggcgctccaatctcttgacctcgacgacgcgctctacaatgccgtgctgaaccaaagt
gcggccggagcgcgacaagctttcgacgcgacctcgggcgagatccacgcgagcgccgtg
acggccgccttcgaggatgcggcccaggtggtccactcggtgacgaaccggctggacgac
gccgatcgtgcgacctcgggcaccgccctgcaatcgctcaatcaattcgctcccccgccc
gcgcttcttcccggctccgcccagggttatgctccgccggcgcagacggttccggtccca
gcatcgctgccctactccctttggggcagcggtttcggcgacttcgggcataacggccgc
aacagcaatgctgcagcgctcgatcgtgcgctcggcggcttcgtgctgggcggcgacgtc
cgcatcgacggatcggccttgaacaactggcgcatcggtctcgtcggtggctacacgaac
gatcagatcgacgtgaaggcgcgcggcgcgtccggcagcgtcgaaacatttttcggtggc
gtctacgggggcgcgcattatggcgcggtcgatatcaagcttggggtcacgggcggtggc
ctccaaactacgacgcagagcaatgtcgcttttcctggcttcatcgaccgcacggacgcg
acctatggtggctcgatggtccagggcttcggtgaaatcggttataagatcgcgctcggc
tacggcacgatcgaacccgttctgcagggcgccgcgatccacattgaccaggatgggttc
accgaacgaggcggagccgccgcgctttcgggcttcacccgaggctatgacgtcgaaacg
acgacgctcggcctccggggagagagcgcaattttcaccacgctgccgctgagcgcccgc
gggtttgtcggctggcgtcatgcattcggcgacgtgaccccgagcgcagtgctggccttt
agcgcgggttcgaatgcgttcgcgatcagtggcagtcccgtcgatcgtgatgctgtggtg
gcggaggttgggctcgactatcatgccgcggcaaatctggtcatcggggtcagctatgcc
ggccaagcgggccaacgcgcttatgacaatgccatttcggcccgcctcgcttatcgcttc
tga
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