Lichenihabitans sp. PAMC28606: LGH83_03640
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Entry
LGH83_03640 CDS
T07621
Name
(GenBank) TetR family transcriptional regulator C-terminal domain-containing protein
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
liz03000
]
LGH83_03640
Transcription factors [BR:
liz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LGH83_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_13
TetR_C_29
HTH_IclR
TetR_C_2
TetR_C_9
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UDL95331
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Position
773245..773886
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AA seq
213 aa
AA seq
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MSEIHSLMRKKSSGRAETEALLLAAAESVFAEQGFGGATTAAIAKRAGLPKSNLHYYFPT
KEALYRAVLANVLEAWLAAAASFDRAASAEQALTAYIEAKMDLARQFPLASRIFASEIMR
GAPLVQDFLETTLKTWLAQREPIIDGWIAAGQLRPLSAKTLIFMIWATTQHYADFAHQIK
TLNGGHDLSTREFDAAKRQVVETILGGILIERP
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaattcattctttgatgcgaaaaaagtcgtcaggtcgagccgaaaccgaggcg
cttcttctggcggctgcggaatcagtctttgcggaacaagggttcgggggtgccaccacg
gctgccatcgccaaacgcgcgggtctgccgaaatccaacctccactattattttccgacc
aaggaagcgctgtatcgcgccgtgctggccaacgtgctcgaagcttggcttgcagcggcg
gcatcgttcgatcgcgcggcgagcgccgaacaagccctgaccgcttatatcgaggccaaa
atggatctcgcccggcagtttccgctcgcctcccgcatctttgccagcgagatcatgcgt
ggcgcgccgctggtgcaggacttcctcgagacaaccctgaagacatggctggcgcagcgc
gagccgatcatcgatggctggatcgcggccggtcaactccgccccctctcggccaagact
ctgatcttcatgatctgggcgacgacgcagcattatgccgattttgcccatcagatcaaa
acgttgaacggcgggcacgatctctcgacacgcgagttcgacgccgccaaacggcaggtc
gtcgagacgattcttggcggtatcctgatcgagcgtccgtga
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