Lichenihabitans sp. PAMC28606: LGH83_04075
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Entry
LGH83_04075 CDS
T07621
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_04075
Enzymes [BR:
liz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LGH83_04075
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LGH83_04075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
UDL95413
LinkDB
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Position
863277..865559
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AA seq
760 aa
AA seq
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MSKSRTIAYGSVGAIVVAGVILAVPTSRHAIRHEIAKHRHFSFSNTTATSVVPVAQAPAT
ILASEADPRFLARSSAEVPAPHLGTVTLDASAFAPPTVTSLAKTATGTDVQPLDKGAASP
VIRSSSDQDGGVGIDLAGARQALRLYRQGDLAAADDFARLTSGPLRTLLDWTAIRLASRQ
AGLPRLEAFKAAHPDWPTLTWINRRIEEAKVATRDPAATLALFASSAPETLFGRLALARA
RIATSDLDGGAGIIRSAWRNDDLTAGEEALILKDFGALLRREDHKFRADRLLYKENLPAA
MRATALAGPDVALLEKARIAVIGSMPSDAAIAAVPKALQSDPGLLFAKIQKARRANKIAD
AATMMLSAPSDPTLLVDGDEWWTERRLVARKLLDAGDAKTAFRICATHGASSNASRIEAE
FHAGWIALRFLNDPVLAAPHFANAATLAESPISTSRAAYWQGRAAAAAGDAPAAARFYDT
AAQQPTTFYGQIANAALGRPPAVLRQPIAVASGPDRREAIQGVGLLFDLGERDLALGLAL
TIAKTEPDQSQVAALASVVAATKDARATLSVGKAAGQRGIALDDAAFPTFGIPAYQPLTN
SADRSTVYAIARQESEFDPRSVSSAGAKGLMQLIGSTARQTAVKAGIDFDETRLLLDAGF
NAQIGAAHLGKLLADENGSYILTFAAYNAGARKVQDWIGIYGDPRKPGVDPIDWIERIPY
SETRNYVQRVFENMQMYRARFGVPTASLSDPQPIVTGKGT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcgcgcaccattgcttatgggtctgtcggggccatcgtggtcgccggcgtg
atcctggcggtgccgaccagccgccatgcgatccgccatgaaattgccaagcaccgccac
ttcagcttcagcaacacaaccgcgacctccgtcgtgccggtcgcacaggcacccgcaacg
atcctggcgagcgaggcagaccctcggtttctcgcccgctcctcggccgaggtccctgcc
ccgcatctcggaacggtgacgctcgacgccagcgccttcgcgccgccgaccgtcacgtcg
ctggccaagaccgcaaccggaacggacgttcaaccgctcgacaagggtgccgcctcaccc
gtgatccgatcatcgagcgatcaggacggtggcgtggggatcgatctcgcaggagcacgc
caggcgctgcggctctatcggcaaggcgaccttgcggcagccgacgatttcgcacgtctc
accagcggcccgctgcggacgctgctcgattggaccgcgattcgtctcgcctcccgacag
gcgggcctgccccgtctcgaagccttcaaggccgcgcatcccgactggccgacgctgacg
tggatcaaccggcgcattgaagaagccaaagtcgcgacacgcgatcctgccgcgacactg
gcgttgtttgccagttcggccccggagaccctgtttggtcgactggcgctggcacgcgcg
aggatcgcgaccagcgacctcgacggaggagcggggatcattcgatcggcctggcgtaac
gatgatctgaccgctggggaagaagccctgatcctgaaggatttcggcgcgctgctcagg
cgggaggatcataaatttcgggccgaccgcttgctctacaaggaaaacctgccagctgcg
atgcgagcgaccgctctcgcgggtccggatgtcgcgctgctcgagaaggcgcgcatcgcg
gtgatcgggtccatgccgtcggatgcggcgatcgcggccgttccgaaagccctgcagagc
gaccccggcctgctcttcgccaaaatccagaaggcgcgccgcgccaataagatcgccgac
gccgccacgatgatgttgtcggccccctccgaccccaccctgctggtggatggcgacgaa
tggtggaccgagcgtcgcctcgtcgcccgcaaactgctcgacgcgggcgacgccaagaca
gcgttccgcatctgcgccacacatggcgcatcgtccaacgcgtcgcgcatcgaagccgag
tttcatgccggctggatcgcattgcgttttctcaacgatcctgttctggcagcgccgcat
ttcgccaatgccgcaactctggccgaaagccccatctcgacgtctcgggcggcttattgg
cagggccgggccgctgcagcagctggcgatgcgccggccgcagcccggttttacgacacg
gccgcgcagcaacccacgacattctatggccaaatcgccaacgcggctctcgggcgcccg
cccgccgtgctgcggcaaccgatcgctgtcgcgtccggtcccgatcgccgagaggcgatc
cagggcgtcggcctcttgttcgatctcggcgaacgggatctggcgctcgggctagccctg
acgatcgccaagaccgagccggatcagagccaagtcgcagcgctcgctagcgtcgtcgcc
gccaccaaggatgcgcgagccaccctgtcggtcggcaaggccgccggccaacgcggcatc
gcgctcgacgatgccgccttcccgacgttcgggatcccggcctaccagccgctcaccaat
tcggccgaccgctcgaccgtctatgcgatcgcgcgacaagagagcgagtttgatccccgg
tcggtatcctccgccggtgcgaaaggcttgatgcagttgatcggctcgacggcgcgtcaa
acagccgtaaaggccgggatcgatttcgatgagacgcggctcttgctcgacgccggtttt
aacgcgcagatcggggcggcgcatctcggcaaactcctggccgacgagaacggctcttac
atcctgaccttcgcggcctataacgccggcgcccgcaaggtgcaggactggattgggatc
tatggcgacccgcgcaagccgggcgtcgatccgatcgactggatcgagcgcattccttat
tcggagacgcgcaactacgtccagcgggtgttcgagaacatgcagatgtatcgcgctcgt
ttcggcgtgccgaccgcgtccctgtcagaccctcagccgatcgtgaccggcaagggaacc
tga
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