Lichenihabitans sp. PAMC28606: LGH83_04345
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Entry
LGH83_04345 CDS
T07621
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGH83_04345
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
liz01007
]
LGH83_04345
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_04345
Enzymes [BR:
liz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
LGH83_04345
Amino acid related enzymes [BR:
liz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LGH83_04345
Transfer RNA biogenesis [BR:
liz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LGH83_04345
Prokaryotic type
LGH83_04345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
UDL95460
LinkDB
All DBs
Position
complement(931196..933907)
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AA seq
903 aa
AA seq
DB search
MDKTFDPAAVEIRTREAWEAADAFASGRPDRAGAAPYSIMMPPPNVTGSLHIGHALNHTL
QDVLARFERMRGKDVLWQPGMDHAGIATQMVVERQLAERQMPDRRTMGREAFIERVWAWK
DESGGQIVDQLKRLGASCDWSRTRFTMDEGLSEAVVQVFVKLYRDGLIYKDKRLVNWDPK
FLTAVSDIEVLAVETRGSLWHFNYPIEGQDGRFITVATTRPETLLGDSAVAVHPDDERYR
DLIGQFAVLPLVGRRIPIVADDYADPEKGSGAVKITPAHDFNDFEVGKRHSLRLINILDA
EARLTLDRNDAFLLDLVASVDLSAVMELHGLDRFAARKRIVAMMEERGLLVAIEPHVHAV
PHGDRSNVVIEPWLTDQWYVDAKTLAAPALEAVRDGRTVFVPKTWEKTYFEWLDNIQPWC
VSRQLWWGHRIPAWYGPDNHVFVAATEAEAQIEAVSVYGDTVELRRDEDVLDTWFSSALW
PFSTLGWPQSTPELSRYYPTSTLVTGFDIIFFWVARMMMMGLHFTGEVPFKDVYMHALVR
DEKGAKMSKSKGNVIDPLRLIDQFGADALRFTLVAMAAQGRDIKLATARVEGYRNFATKL
WNAARFAEMNGCERVAGFDPKALREPLNRWIIDEASKAAADVTTALEAYRFNDAAAVVYR
FVWNLYCDWYLELAKPLLTGPDGDAKAETRATTAFVLDHILTMLHPFMPFITEELWAIKG
QQGPARSALLALTAWPTQTPDSDADAASAEIGWIIDLISEIRSVRSELNVPAGAQIPLHL
LDAEASAIDRLGRWEETLKRLARLSEIVSVAAADQGSVQIVVAGLTAVMPLGAVIDIAAE
RHRLRKDVAKIEAEVAKIEAKLGNADFVERAPEEVIEENRERRAEALARADKLRNAIDRL
SES
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggataagaccttcgatccggccgcggtcgaaatacgaacacgtgaagcctgggaggcg
gcagacgcttttgcgtcaggccgaccagatcgcgccggcgcggcgccttatagcatcatg
atgccgcccccgaacgtgacggggtcgctccatatcggccatgcgctcaaccatacgcta
caggacgtgctggcccgcttcgagcggatgcgcggcaaggacgtgttgtggcaaccgggc
atggaccatgccggtatcgcgacccagatggtcgtcgagcgccagcttgccgagcggcag
atgcccgatcggcggacaatgggacgcgaggccttcatcgagcgtgtgtgggcctggaag
gacgagtcgggcggccagatcgtcgatcagctcaagcgtcttggtgcctcctgcgactgg
tctcgcacgcggttcacgatggatgaggggctaagcgaggccgtcgtccaggtgttcgtc
aaactatatcgcgacgggctcatctataaagacaaacgtctcgtcaattgggatccgaaa
tttctgacggccgtgtcggatattgaggttctggcggtcgagacccgcggctccctgtgg
catttcaactatcccatcgaggggcaagacggtcgtttcatcacggttgcgacgacgcga
cccgagacgttgctgggcgatagcgcggttgcggttcatccggatgatgagcgctatcgc
gatctcatcggtcaatttgccgtcctgccgctcgtcgggcgccgtattccgatcgtggct
gatgactatgcggacccggaaaagggatccggcgcggtcaagattacgccggcgcatgac
tttaatgatttcgaagtcggaaagcgccattcgttacgccttatcaatattttggatgcg
gaagctcgtttaacgctggaccgcaacgacgcgtttctgctcgatctcgtcgcctccgtc
gatctatcggccgtgatggagctgcatggtctcgacagatttgcggcgcggaagcggatc
gtcgcgatgatggaggagcgcgggctgctcgtcgcgatcgagccgcatgttcatgccgtg
ccgcatggtgatcggtcgaacgtggtgatcgagccgtggttgacggatcaatggtatgtc
gatgcgaagacgcttgcggcgccggcactcgaggctgtgcgggacggccggacggtgttc
gtgccgaagacttgggaaaaaacctatttcgagtggttggacaacatccagccctggtgt
gtgtcgcggcaactctggtggggtcaccgcatcccggcttggtatggcccagacaaccac
gtcttcgtcgccgccaccgaggccgaggcgcagatcgaggccgtctcggtctatggcgac
acggtcgaattgcggcgcgacgaggatgtgctcgacacatggttctcgtcggcgttgtgg
ccgttttcgaccctcggttggccgcagtcgacgcccgaactctcccgttactatcccacg
tcgacgctggtgaccggattcgacatcatcttcttctgggttgcccgtatgatgatgatg
ggtctgcattttaccggcgaggttccctttaaagacgtctacatgcacgcgctcgtccgg
gacgagaagggcgcgaagatgtcgaaatcgaagggcaacgtcatcgacccgctgcggctc
atcgatcagttcggtgcggatgcgttgcgcttcaccttggtggcgatggcggcacagggc
cgcgacatcaaattggcgaccgcgcgggtcgagggctatcgcaattttgcgaccaagctg
tggaacgccgcgcgctttgccgaaatgaacggctgcgagcgggtcgcgggtttcgacccc
aaggcgctgcgcgagccgctcaatcgctggatcatcgacgaggccagcaaagccgccgcc
gacgtgacgaccgctctcgaggcgtatcggttcaacgatgccgcggcagtggtctatcga
ttcgtctggaacctctactgcgattggtatcttgagctcgccaagccgcttctgaccggg
cccgatggcgacgcaaaagccgaaacgcgggcgacgacagccttcgtgctcgatcacatt
ttgacgatgctccacccgttcatgccgttcatcacggaagagctttgggccatcaaaggc
caacagggcccggcgcgctcggccctgttggctctcaccgcatggccgacgcaaacgcct
gactcggatgccgatgcggcctcggccgaaatcggctggatcatcgacctgatctcggaa
attcgatcggttcggtccgagttgaacgttccggccggcgcgcaaattccgttgcatctg
ctcgatgccgaggcaagtgcgatcgaccgtctaggccggtgggaggagacgttaaagcgc
ctggctcgcctgtcggagatcgtgagcgtcgcggccgcggatcaaggctcggtgcagatc
gtcgttgctggattgaccgccgtcatgccgctcggggccgtgatcgacatcgcggccgag
cgtcatcgcctccgcaaggacgtcgccaagatcgaggccgaggtggccaaaatcgaggcc
aagcttggcaatgcggatttcgtcgagcgggctcccgaagaagtgatcgaagaaaaccgt
gagcgacgcgccgaggctctggcgcgtgccgataagctccgcaacgccatcgatcgctta
agcgaatcttga
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